GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~10x1.5mm. Squamous mucosa, well preserved, ~30-40% of thickness
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1326 |
Stomach
|
PAXgene |
1
|
6 pieces, ~9x1.5mm, remarkably well-preserved mucosa 50-70% of thickness
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1426 |
Omentum
|
PAXgene |
1
|
2 pieces ~9x8mm
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~9x2mm. Mucosa partly sloughed, not well preserved
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, ~7x2mm minimal muscle; only 2 have significant lymphoid cells, encircled. Abundant fat/mucosa in 5.
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~8x2mm. All muscle in 3; contaminant mucosa is 3, encircled
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1826 |
Prostate
|
PAXgene |
1
|
2 pieces ~11x7mm. Glandular hyperplasia
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1926 |
Testis
|
PAXgene |
1
|
2 pieces ~11x7mm. Spermatogenesis is markedly reduced for age of the patient
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-2026 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces ductal elements present, representative ones encircled
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-2126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces ~7x3mm. Squamous epithelium is ~2-3% of thickness
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-2226 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7x3mm. Squamous epithelium is ~2-3% of thickness
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~13x8mm
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-2426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~14x8mm. minimal interstitial fat
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-2526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~5mm d. ~30% fat, (interstitial), focal ~1mm adherent rim rim of, encircled
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-2626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, good clean specimens, ~4mm d. No atherosis
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 7x5 & 6.5x4mm; polymorphs present in some areas
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 7x5.5 & 12X6mm;well sampled
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0326 |
Lung
|
PAXgene |
1
|
2 pieces, 6x6 & 7x6mm; heart failure cells, mild patchy pneumonia
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 8x5mm; well sampled muscle without extraneous tissue
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0526 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 10x2mm; small amount of untrimmed adventitial stroma
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces, 11x6.5 & 8.5x7mm; 1 piece with ~40% internal adipose, other without adipose
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 7x6mm; well sampled muscularis
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 6x4mm; well sampled and well preserved mucosa with focal chronic esophagitis
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 8x3mm; lymphoid tissue with slight autolysis, mucosa has moderate autolysis; abundant lymphoid tissue, up to 5 x 0.8 mm in 2 pieces, small focal lymphoid nodules in 3 and none in 1 piece; ~20% untrimmed muscularis in 3 pieces
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-1026 |
Omentum
|
PAXgene |
1
|
2 pieces, 7x6 & 8x7.5mm; central unfixed holes up to 3mm across
|
Acceptable
|
|