GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-0426 |
Gastroesophageal junction
|
PAXgene |
3
|
6 pieces; all are gastric mucosa, not target
|
Unacceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-0526 |
Omentum
|
PAXgene |
1
|
2 pieces; minimal fibrovascular component
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-0626 |
Uterus
|
PAXgene |
1
|
2 pieces; only myometrium in these sections, no endometrium
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; no intimal lesions; up to 0.9mm thickfibrovascular adventitia
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-0826 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; minimal dermal fat
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-0926 |
Ovary
|
PAXgene |
1
|
2 pieces; plentiful ova in outer portion
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibroadipose tissue devoid of mammary parenchyma (in these cuts)
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; 1 piece contains 60% salivary glands and 40% fibrous stroma and squamous epithelium; smaller piece is all fibrous stroma [images annotated]
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1226 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed; muscularis (present in 5 of 6 pieces) moderately autolyzed
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1326 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed; 5% dermal fat
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; <5% fibrovascular content
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; up to 10% internall fat
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1626 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; well dissected; 10% internal fibrofatty content
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; no lesions; up to 0.6 mm extraneous peripheral fibrovascular (1 lymphoid-rich) tissue [annotated]
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all contain mucosa and submucosa as well as variable amounts of muscularis; sample is of limited value; LCM
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; variable amounts of mucosa sampled
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; no lymphoid tissue; full thickness of wall
|
Unacceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-2126 |
Vagina
|
PAXgene |
1
|
6 pieces; sample is keratinized and has skin appendages: labia not target vagina
|
Unacceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-0126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-0226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.7mm, few submucosal mucus glands noted, rep encircled
|
Acceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-0326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, trace atherosis
|
Acceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-0626 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, well fixed cortex and central medulla (delineated) adherent nubbins of fat up to ~2mm, rep encircled
|
Acceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces, focal remote pancreatitis, ensquared; Islets well preserved, rep. encirlced
|
Acceptable
|
|