GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-0626 |
Thyroid gland
|
PAXgene |
2
|
2 aliquots, ~6x6mm. Patchy regressive changes
|
Acceptable
|
 |
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-0826 |
Coronary artery
|
PAXgene |
2
|
2aliquots, ~2.5mm d. Subtotally occlusive atheroscerosis
|
Acceptable
|
 |
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-0926 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 aliquots, ~6x6mm. No mammary ductal elements noted
|
Acceptable
|
 |
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-1026 |
Heart
|
PAXgene |
2
|
2 aliquots ~8x7mm. Focal healed infarct, ~1.5mm d.
|
Acceptable
|
 |
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-1226 |
Aorta
|
PAXgene |
2
|
6 pieces, ~9x2mm
|
Acceptable
|
 |
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-1326 |
Liver
|
PAXgene |
2
|
2 aliquots, ~8x7.5mm. Diffuse macrovesicular steatosis, ~50% of parenchyma
|
Acceptable
|
 |
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-1426 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces ~7x2.5mm
|
Acceptable
|
 |
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-0826 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 9x5 mm; surface mostly sloughed
|
Acceptable
|
 |
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1226 |
Stomach
|
PAXgene |
2
|
6 pieces up to 11x5 mm; deep oxyntic mucosa better preserved than surface; varies from piece to piece
|
Acceptable
|
 |
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1326 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 12x6 mm; cassette marking on tissue due to 'snug fit' in cassette; considerable epithelial sloughing
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-0526 |
Muscle, skeletal
|
PAXgene |
2
|
2 aliquots, ~9x7mm. Minimal interstital fat. Unusually poorly preserved
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-0726 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 alqiuots, ~8x8mm. All adipose, no ductal elements noted.
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-0826 |
Thyroid gland
|
PAXgene |
2
|
2 aliquots, ~6x6mm. INCORRECT TISSUE: SKELETAL MUSCLE, UNCERTAIN PROVENANCE.
|
Unacceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-1026 |
Heart
|
PAXgene |
2
|
2 aliquots, ~9x5mm. Confluent foci of remote fibrotic infarcts up to 7x3mm in dimensions, encircled
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-1126 |
Liver
|
PAXgene |
2
|
2 aliquots, ~7.5x5mm, diffuse microvesicular steatosis, possible mild chronic hepatitis, but portal tracts badly autolyzed, compromising assessment.
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2026 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, ~8x3.5mm
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2526 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces, ~5x4mm. Granular layer poorly preserved
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2626 |
Brain - cortex
|
PAXgene |
2
|
4 pieces, ~5x4mm
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0326 |
Testis
|
PAXgene |
2
|
2 aliquots, ~8x5mm. Spermatogenesis is noted
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-0926 |
Lung
|
PAXgene |
2
|
2 aliquots, 10x 7mm, foci of chronic inflammation--areas of emphysematous damage
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1326 |
Liver
|
PAXgene |
2
|
2 aliquots, ~8x6mm. Diffuse macrovesicular steatosis involves ~70% of specimen
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1626 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, ~8x3mm
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, ~6.5x2.5mm . Tublules moderately--severely autolyzed.
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2026 |
Kidney - medulla
|
PAXgene |
2
|
2 aliquots, ~9x8mm. LDACC ALERT: Medulla is ~ 80% of one, ensquared; the other is all cortex
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, 7x2.5mm. Mucosa is ~30-50% of thickness, poorly preserved
|
Acceptable
|
 |