GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2426 |
Omentum
|
PAXgene |
1
|
2 pieces, 10x6 & 8x8mm;
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2526 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 8x3mm; moderate-severe autolysis, ~30% lymphoid elements, rep areas delineated, good specimen
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 7x2mm; 20-30% fat, mainly muscularis, trace autolyzed mucosa
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 9x3mm; Mucosa badly autolyzed, ~25% of thickness
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2826 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, up to 5x3mm; ischemic changes in Purkinje cells
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2926 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, up to 6x4mm;
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-3026 |
Pituitary gland
|
PAXgene |
1
|
1 piece, 8x5.5mm;
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 8.5x7 & 9x9mm; numerous giant cell granulomas, some with asteroid bodies c/w sarcoidosis
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0226 |
Atrial appendage
|
PAXgene |
0
|
2 pieces, 10x10 & 11x7mm;
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 9x4mm; 2mm wall and about 1 mm extraneous adipose; no plaques
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0426 |
Heart
|
PAXgene |
1
|
2 pieces, 9x5 & 9x7mm; muscle without extraneous adipose
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x4 & 4x2.5mm; myocardium, vein and adipose tissue, NO ARTERY
|
Unacceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0626 |
Lung
|
PAXgene |
1
|
2 pieces, 9.5x6 & 10x7mm; giant cell granulomas and interstitial fibrosis c/w sarcoidosis (clinical history of sarcoid)
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces, 12x10 & 11x11mm; 20% intraglandular adipose
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 10x8 & 10x7mm;
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-0926 |
Omentum
|
PAXgene |
0
|
2 pieces, 7.5x6 & 8x7mm; no artifacts
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1026 |
Prostate
|
PAXgene |
1
|
2 pieces, 7x6 & 8x6.5mm; virtually all composed of fibromuscular tissue
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 9x5mm; good pure muscularis propria in all
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 8x3mm; good pure muscularis propria in all
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1326 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces, up to 7x3mm; well preserved mucosa with prominent muscularis mucosae and fibrotic submucosa; most have parts of UNWANTED muscularis propria (see annotated image)
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 7x4mm; all pieces contain mostly muscle; only 2 have minute foci of mucosa
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1526 |
Ileum
|
PAXgene |
2
|
6 pieces, up to 9x4mm; all pieces contain mostly muscle; 5 have mucosa and one small lymphoid nodule
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 7x3mm; well dissected muscularis
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 7.5x4mm; focally sloughed glands
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 12x7 & 10x6mm; gynecomastia: fibrosis and ducts
|
Acceptable
|
 |