GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-1926 |
Urinary bladder
|
PAXgene |
2
|
6 pieces, ~8x3mm. Urothelium completely sloughed, badly autolyzed
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2126 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, ~7x2.5mm
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2526 |
Brain - cerebellum
|
PAXgene |
2
|
4 aliquots, ~ 5x4mm. Granular layer most autolyzed
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2626 |
Brain - cortex
|
PAXgene |
2
|
1 aliquot pituitary, ~5x3mm. All neurohypophysis
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-0326 |
Heart
|
PAXgene |
2
|
2 pieces, 12x8 & 9x9 mm; 30% adipose; patchy hypereosinophilia (ischemia)
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-0726 |
Kidney - cortex
|
PAXgene |
2
|
2 pieces, 10x9 & 10x7 mm; all cortex no medulla; ~ 20% sclerotic glomeruli, others with partial sclerosis
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-0826 |
Kidney - medulla
|
PAXgene |
2
|
6 pieces up to 9x4 mm; all medulla, no cortex
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-1026 |
Adrenal glands
|
PAXgene |
2
|
2 convoluted pieces up to 20 mm with ~ 20% adipose
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-1126 |
Testis
|
PAXgene |
2
|
2 pieces, 13x6 &11x9 mm; spermatogenesis; 4x3 mm rete testis at one pole; 3x1.5 mm capsule in other piece
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-1226 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 10x10 & 10x8 mm;
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-1726 |
Lung
|
PAXgene |
2
|
2 pieces, 9x8 & 8x7 mm; moderate patchy recent hemorrhages and congestion
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-1826 |
Spleen
|
PAXgene |
2
|
2 pieces, 9x9 & 8x7 mm; moderate to severe congestion
|
Acceptable
|
|
GTEX-RWS6
|
61-70
|
Female
|
GTEX-RWS6-1426 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 11x4 mm; epithelium thin, flattened, partly sloughed
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1526 |
Pancreas
|
PAXgene |
2
|
2 aliquots, ~6.5x6mm. Badly autolyzed, saponfication. LCACC ALERT: ~30% of one aliquot is all fat (circled in pink)
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1626 |
Spleen
|
PAXgene |
2
|
2 aliquots, ~6.5x6mm. Marked congestion
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, 7x3mm.
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1926 |
Kidney - medulla
|
PAXgene |
2
|
2 aliquots, ~9x6mm. LDACC alert: All of one and ~60% of the other are pure medulla (encircled) ~40% of one is cortex. Tubules badly autolyzed.
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-2126 |
Urinary bladder
|
PAXgene |
2
|
6 pieces ~7x2mm. Urothelium largely sloughed, where evaluable is 1-2% of thickness
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1626 |
Cervix - endocervix
|
PAXgene |
2
|
4 pieces up to 7x4 mm; all endocervix
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1826 |
Stomach
|
PAXgene |
2
|
7 pieces up to 8x3 mm; all have mucosa, 4 have muscularis as well
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1526 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces 8x7 & 7x6 mm; <5% focus of cortex at one edge
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1726 |
Spleen
|
PAXgene |
2
|
2 pieces 7x7 & 7x4 mm; moderately congested red pulp; large piece shows cassette grid compression artifact
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-2026 |
Stomach
|
PAXgene |
2
|
6 pieces up to 8x3 mm; oxyntic mucosa thick, but moderately autolyzed as is muscularis
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces up to 9x2 mm; mucosa on all (but autolyzed); muscularis varies in extent; submucosa heavily adiposed
|
Acceptable
|
|
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-0526 |
Muscle, skeletal
|
PAXgene |
2
|
2 alqiuots, ~7x7mm. Minimal interstital fat, unusally poorly preserved
|
Acceptable
|
|