GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1426 |
Vagina
|
PAXgene |
0
|
6 pieces up to 8x4 mm; well preserved mucosa on all pieces
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-2026 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 12x6 & 7x7 mm; minimal adipose
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-2126 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 6x4 & 3x3 mm; <10% adipose in larger
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-2226 |
Artery - tibial
|
PAXgene |
0
|
2 pieces: 3x2 & 1.8x1.7 mm; larger contains 2 normal arteries, 1 small vein & 40% surrounding fibrous stroma; Smaller artery has 20% stroma
|
Acceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-0126 |
Thyroid gland
|
PAXgene |
0
|
2 aliquots, one is all fat/skeletal muscle, the other about 50% thyroid.
|
Unacceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-0226 |
Aorta
|
PAXgene |
0
|
6 pieces, ~9x1.5mm
|
Acceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-1226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, ~7x2.5mm. Squamous epithelium is ~1-3% of thickness
|
Acceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-1326 |
Adipose tissue
|
PAXgene |
0
|
2 aliquots, ~9x6mm
|
Acceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-1426 |
Muscle, skeletal
|
PAXgene |
0
|
2 aliquots, ~5x4mm, one additional fragment ~3.5mm. Minimal interstitial fat
|
Acceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-1526 |
Nerve - tibial
|
PAXgene |
0
|
2 aliquots, ~5x3mm, discontinuous adherent rim of fat, up to 0.5mm thickness
|
Acceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-1626 |
Artery - tibial
|
PAXgene |
0
|
2 aliquots, ~2mm d. Small tags of focally adherent fibrous tissue ensquared.
|
Acceptable
|
 |
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0926 |
Fallopian tube
|
PAXgene |
0
|
2 pieces 8x3 & 6x5 mm; excellent preservation
|
Acceptable
|
 |
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1126 |
Vagina
|
PAXgene |
0
|
6 pieces up to 8x4 mm; all with epithelium
|
Acceptable
|
 |
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1526 |
Colon, transverse
|
PAXgene |
0
|
6 pieces up to 7x4 mm; mucosa ~0.4 mm; very good mucosal preservation in all 6 pieces
|
Acceptable
|
 |
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1626 |
Skin, leg
|
PAXgene |
0
|
6 pieces up to 8x3 mm
|
Acceptable
|
 |
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-2026 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 7x4 & 6x3 mm; minimal adipose
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-0126 |
Heart
|
PAXgene |
0
|
2 pieces 8x7 & 8x6 mm; contraction bands (hypoxia) no scars or infarcts; no adipose
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-0226 |
Coronary artery
|
PAXgene |
0
|
2 pieces 4x2 & 3x2 mm; larger has 50% adherent adipose; smaller has <10% adipose; minimal plaque
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-0426 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces up to 5x4 mm; clean no adipose or submucosa
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-0526 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 7x2 mm; all with good squamous mucosa
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-0726 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 piece 8x8 & 9x7 mm; several small ducts; 99% adipose
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-1526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 5x2 & 3x2 mm; larger with an artery and vein; other with artery. clean, no adherent adipose, no lesions
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-1626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 5x3 & 2x2 mm; minimal adipose
|
Acceptable
|
 |
GTEX-SNOS
|
41-50
|
Male
|
GTEX-SNOS-0826 |
Stomach
|
PAXgene |
0
|
6 pieces up to 8x5 mm; very good mucosal preservation
|
Acceptable
|
 |
GTEX-SNOS
|
41-50
|
Male
|
GTEX-SNOS-0926 |
Pancreas
|
PAXgene |
0
|
2 pieces 10x9 & 10x2 mm; <10& peripheral adipose; good preservation
|
Acceptable
|
 |