GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-0326 |
Thyroid gland
|
PAXgene |
0
|
2 aliquots, ~12x8mm. Diffuse Hashimoto's/lymphocytic thyroiditis. Germinal centers encircled.
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-0626 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces, ~7x2mm. Squamous mucosa well preserved, ~15-20% of thickness. Submucosal mucus glands encircled
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-0726 |
Stomach
|
PAXgene |
0
|
6 pieces,~10x2.5mm. Mucosa extremely well preserved, 30-50% of thickness. Basal lymphoid aggregates encircled
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1126 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 aliquots, ~18x9mm. Male ductal units well-seen in one, examples encircled
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1326 |
Artery - tibial
|
PAXgene |
0
|
2 aliquots, ~4.5mm d. Fairly clean specimens
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1426 |
Nerve - tibial
|
PAXgene |
0
|
2 aliquots, ~2.5mm d. LDACC NOTE: Rim of fat/fibrous tissue up to ~1mm, discontinuous
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1526 |
Muscle, skeletal
|
PAXgene |
0
|
2 aliquots, 11x7mm. Minimal interstitial fat.
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1626 |
Adipose tissue
|
PAXgene |
0
|
2 aliquots, ~10x9mm.
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1726 |
Skin, leg
|
PAXgene |
0
|
6 pieces, ~9x4mm. Squamous epithelium is ~2-3% of thickness.
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0126 |
Skin, leg
|
PAXgene |
0
|
6pieces, 6.5x2.5mm, squamous epithelium is ~1-3% of thickness
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0226 |
Adipose tissue
|
PAXgene |
0
|
2 aliquots, 8x6mm
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 aliquots, ~4mm d.
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0426 |
Artery - tibial
|
PAXgene |
0
|
2 aliquots, ~1.5mm d.
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 aliquots, ~7x6mm. Minimal (<5%) interstitial fat
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0626 |
Thyroid gland
|
PAXgene |
0
|
2 aliquots, ~7x6mm, diffuse lymphocytic/Hashimoto's thyroiditis with prominent regressive changes
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0726 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 aliquots, ~7x5mm. Post-menopausal TDLUs present, encricled
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1626 |
Stomach
|
PAXgene |
0
|
6 pieces, ~6x4mm pieces. Mucosa extremely well-preserved, ~20-30% of thickness
|
Acceptable
|
 |
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0326 |
Thyroid gland
|
PAXgene |
0
|
2 pieces 11x9 & 9x4 mm; 1, 4mm cystic follicle
|
Acceptable
|
 |
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0426 |
Lung
|
PAXgene |
0
|
2 pieces 11x8 & 10x8 mm; no congestion or exudates
|
Acceptable
|
 |
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces 10x7 & 8x6 mm; good specimen
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0226 |
Thyroid gland
|
PAXgene |
0
|
2 pieces 10x6 mm; 10% peripheral fibroadipose
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0726 |
Fallopian tube
|
PAXgene |
0
|
2 pieces 13x4 & 9x4 mm; 1 piece has 60% fibrofatty vascularized stroma; smaller piece has 30% adipose
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0826 |
Uterus
|
PAXgene |
0
|
2 pieces 8x7 mm; all myometrium, no endometrium
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0926 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 8x3.5 mm; all have mucosa and abundant submucosal glands
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1326 |
Ovary
|
PAXgene |
0
|
2 pieces 10x9 & 10x8 mm; atrophic, no ova, old corpora
|
Acceptable
|
 |