NIH, National Cancer Institute, Division of Cancer Treatment and Diagnosis (DCTD) NIH - National Institutes of Health National Cancer Institute DCTD - Division of Cancer Treatment and Diagnosis

GTEx Histological Images

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Case ID Age Gender Specimen ID Tissue Type Fixative Autolysis Pathology Review Comments Acceptability Action
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1026 Esophagus - mucosa PAXgene 1 6 pieces ~6x1.5mm. Squamous mucosa up to ~200 microns thick or ~15% Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1126 Esophagus - muscularis PAXgene 1 6 pieces ~10x4mm Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1226 Stomach PAXgene 3 6 pieces ~9x3.5mm. Mucosa totally autolyzed, partly sloughed Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1326 Colon, transverse PAXgene 1 6 pieces ~8x3mm. Mucosa remarkably well-preserved, ~10-20% of thickness Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1426 Mammary tissue (breast) PAXgene 1 2 pieces ~10x6mm. Numerous ductal units visible, some encircled, evidence of gynecomastoid hyperplasia Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1526 Testis PAXgene 1 2 pieces ~10x8mm. Spermatogenesis markedly reduced Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1626 Nerve - tibial PAXgene 1 2 pieces ~1.5mm d. NOTE: up to 1-1.5mm layer of adherent fat Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1726 Artery - tibial PAXgene 1 2 pieces ~1.5mm. NOTE: up to 1.5mm layer of adherent fat and smaller vessels Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1826 Adipose tissue PAXgene 1 2 pieces ~10x10mm Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-1926 Muscle, skeletal PAXgene 0 2 pieces ~10x5mm. ~15-20% interstitial fat Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-2026 Skin, leg PAXgene 0 6 pieces ~7x3mm. Squamous epithelium is 1-2% of thickness Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0126 Spleen PAXgene 1 2 pieces, 9x5 & 8x6 mm; not overly congested Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0226 Liver PAXgene 1 2 pieces, 9x7 & 8x7 mm; moderate macrovesicular steatosis; no fibrosis Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0326 Thyroid gland PAXgene 1 2 pieces 10x5 & 8x4 mm; 2.5x1.7 mm fibrosed projection on smaller piece Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0426 Coronary artery PAXgene 0 2 pieces, 2.8 & 2.9 mm arteries with up to 1 mm surrounding adipose Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0526 Aorta PAXgene 1 6 pieces up to 10x1.5 mm; no plaques; good architecture Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0626 Lung PAXgene 1 2 pieces 10x8 & 9x8 mm; panacinar emphysema; 2x1.6 mm pleural adipose focus (pleural tissue should be avoided) Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0726 Uterus PAXgene 1 2 pieces 11x9 & 9x8 mm; endometrium (0.9 mm thick) on larger one; none on the other Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0826 Adrenal glands PAXgene 0 2 pieces 7x7 & 10x8 mm; cortex and medulla; one with ~40% peripheral adipose and other with ~20% adipose Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-0926 Vagina PAXgene 0 6 pieces up to 8x4 mm; well preserved Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-1026 Ovary PAXgene 0 2 pieces, 10x7 & 8x7 mm; ova seen; peritoneal surface present Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-1126 Fallopian tube PAXgene 0 2 pieces 9x4 & 6x5 mm;; very good fimbriated specimens; one has ~60% vascularized fibroadipose stroma at one end; other has <10% surrounding stroma Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-1226 Urinary bladder PAXgene 1 6 pieces up to 8x5mm; 3 have good mucosa, 3 have no mucosa, but outer muscle and abundant adipose (up to 5x5 mm) Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-1326 Pancreas PAXgene 3 2 pieces 11x9 & 9x6 mm; 2 mm saponified adipose along edge of one piece; Acceptable View Image
GTEX-U3ZN 21-40 Female GTEX-U3ZN-1426 Heart PAXgene 0 2 pieces 9x7 & 7x6 mm; good clean specimen; papillary muscles with endothelium Acceptable View Image