|
GTEX-ZP4G
|
21-40
|
Female
|
GTEX-ZP4G-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fascia/vessels, rep. areas delineated
|
Acceptable
|
 |
|
GTEX-ZPCL
|
61-70
|
Female
|
GTEX-ZPCL-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces. Well dissected, 10% internal fat and fibrous tissue
|
Acceptable
|
 |
|
GTEX-ZPCL
|
61-70
|
Female
|
GTEX-ZPCL-1726 |
Ileum
|
PAXgene |
1
|
6 pieces. 3 have good lymphoid tissue (marked), BUT all have full thickness muscle as well rather than mucosa only. The muscle makes up over 50% of the pieces. Will be difficult to get lymphoid data.
|
Acceptable
|
 |
|
GTEX-ZPCL
|
61-70
|
Female
|
GTEX-ZPCL-1926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces. Atrophic fibroadipose tissue with ducts & lobules. No sign of cancer or atypia.
|
Acceptable
|
 |
|
GTEX-ZPCL
|
61-70
|
Female
|
GTEX-ZPCL-2126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces. Large size needed refixing.
|
Acceptable
|
 |
|
GTEX-ZPIC
|
41-50
|
Female
|
GTEX-ZPIC-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, adherent fat/fibrous tissue, up to ~0.7mm on both, delineated. Minimal atherosis
|
Acceptable
|
 |
|
GTEX-ZPIC
|
41-50
|
Female
|
GTEX-ZPIC-1126 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, largely adipose stroma; few ductal/lobular elements, atrophic, are present, rep. ones delineated
|
Acceptable
|
 |
|
GTEX-ZPIC
|
41-50
|
Female
|
GTEX-ZPIC-1826 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5-10% fibrous/fascial tissue, rep foci delineated
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-0226 |
Pancreas
|
PAXgene |
2
|
2 pieces, includes 10-20% internal and attached adipose tissue, some atrophy and fibrosis, focal islets with amyloid-like material
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-0426 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, one piece has small attachment of adipose and fibrovascular tissue, focal adipose metaplasia of stroma
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, predominantly well trimmed, few pieces with minimal attached adipose tissue
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1226 |
Omentum
|
PAXgene |
1
|
2 pieces, not atrial appendage as originally labeled; adipose tissue,with central defects (? incomplete fixation), tissue exceeds recommended size
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1826 |
Ileum
|
PAXgene |
1
|
6 pieces, two with abundant mucosal lymphoid tissue , other with ileocecal mucosa with focal lymphoid aggregates, all also have abundant muscularis (not target)
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2226 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, adipose tissue with ~5% fibrous tissue, no ductal elements identified
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2326 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, chronically inflamed salivary gland comprises only ~5% of total tissue (delineated), rest is predominantly mucosa and stroma
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2426 |
Adipose tissue
|
PAXgene |
1
|
3 pieces, scant fibrous tissue, central defect (? incomplete fixation)
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2526 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 10% attached and internal adipose tissue, squamous epithelium is 50 to 75 microns thick
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, minimal internal adipose tissue
|
Acceptable
|
 |
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, not artery as originally labeled; nerve with some internal and up to 1.3mm attached adipose tissue
|
Acceptable
|
 |
|
GTEX-ZQG8
|
61-70
|
Female
|
GTEX-ZQG8-0726 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces. Atrophic: small ducts, no lobules.
|
Acceptable
|
 |
|
GTEX-ZQG8
|
61-70
|
Female
|
GTEX-ZQG8-1526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; fat (not skin as originally labeled)
|
Acceptable
|
 |
|
GTEX-ZQG8
|
61-70
|
Female
|
GTEX-ZQG8-1726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces. Adipose tissue, no muscle
|
Unacceptable
|
 |
|
GTEX-ZQG8
|
61-70
|
Female
|
GTEX-ZQG8-2526 |
Ileum
|
PAXgene |
1
|
6 pieces. Very small foci of mucosal ileocecal lymphoid tissue in 2 pieces (marked). All pieces have large amounts of muscle; 4 have only muscle
|
Acceptable
|
 |
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0526 |
Omentum
|
PAXgene |
1
|
2 pieces, ~10 fiborvacular tissue, rep areas delineated
|
Acceptable
|
 |
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~50% fibrovascular elements, rep. areas delineated
|
Acceptable
|
 |