GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2726 |
Cervix - ectocervix
|
PAXgene |
2
|
4 ~7x5mm aliquots, few minute foci of squamous mucosa present
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2826 |
Cervix - endocervix
|
PAXgene |
2
|
4 ~6x4mm aliquots. No visible/viable mucosa
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0526 |
Liver
|
PAXgene |
2
|
2 ~ 9x7mm aliquots
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-1126 |
Thyroid gland
|
PAXgene |
2
|
2 ~8.5x6mm aliquots, regressive changes noted
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-1326 |
Pituitary gland
|
PAXgene |
2
|
1 ~11x4.5mm aliquot
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2026 |
Lung
|
PAXgene |
2
|
2 ~ 10.5x8.5 aliquots. Bronchiolar mucosa largely sloughed; moderate-alveolar congestion
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2226 |
Spleen
|
PAXgene |
2
|
2 ~ 7.5x7.5mm aliquots, red pulp congested
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2926 |
Brain - cerebellum
|
PAXgene |
2
|
4 ~5x4mm aliquots, granular layer with more autolytic changes
|
Acceptable
|
|
GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-0426 |
Testis
|
PAXgene |
2
|
2 ~8.5x7.5mm aliquots. Leydig cells seem unusually prominent. Spermatogenesis assessment hampered by unusually poor preservation
|
Acceptable
|
|
GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-1226 |
Spleen
|
PAXgene |
2
|
2 ~8.5x6mm aliquots; red pulp markedly congested
|
Acceptable
|
|
GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-2026 |
Colon, transverse
|
PAXgene |
2
|
6 ~8x2mm pieces; mucosa is 10-20% of thickness
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-0626 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces 7x7 & 7x6 mm; 1 piece has 90% adjacent adipose tissue; other has ducts and lobules with ~20% admixed adipose tissue
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces 7x6.7 & 8x7 mm
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-1026 |
Lung
|
PAXgene |
2
|
2 pieces 11x10 & 10 x 8 mm; no infiltrates
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-1226 |
Liver
|
PAXgene |
2
|
2 pieces 9x8 & 8x7 mm; centrally congested and moderately autolyzed centrally
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces measuring up to 7.5x3.6 mm; all show extensive destruction of renal parenchyma with fibrosis, calcification and ‘thyroidization’ characteristic of chronic pyelonephritis; arteries greatly thickened; no viable glomeruli;
|
Unacceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-1826 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces 14x9 & 9x7 mm; virtually all adipose tissue
|
Unacceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-2026 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 9x4 mm; mucosa totally sloughed; muscle mild autolysis
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-0326 |
Artery - tibial
|
PAXgene |
2
|
2 pieces, 4x4 & 3x3 mm arteries; one with medial calcification
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-0526 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces, both 9x7 mm;
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-0626 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces, 8x8 & 9x9 mm; ducts and lobules present; 80% adipose tissue
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-0826 |
Coronary artery
|
PAXgene |
2
|
2 pieces, 6x3 & 4x4 mm; both 3 mm arteries are heavily calcified; ~30-40% adjacent external adipose tissue
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-1026 |
Lung
|
PAXgene |
2
|
2 pieces 10x8 mm each; hyalin membranes; small vessel sclerosis; no pneumonia
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-1126 |
Aorta
|
PAXgene |
2
|
6 pieces up to 10x1.7 mm; minimal intimal sclerosis
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-1226 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces up to 7x2 mm; squamous surface partly sloughed and detached; dilated submucosal veins (varices)
|
Acceptable
|
|