NIH, National Cancer Institute, Division of Cancer Treatment and Diagnosis (DCTD) NIH - National Institutes of Health National Cancer Institute DCTD - Division of Cancer Treatment and Diagnosis

GTEx Histological Images

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Case ID Age Gender Specimen ID Tissue Type Fixative Autolysis Pathology Review Comments Acceptability Action
GTEX-T6MO 21-40 Female GTEX-T6MO-1926 Artery - tibial PAXgene 0 2 pieces ~4.5mm d generally clean specimen, trace adherent fat/fibrous tissue Acceptable View Image
GTEX-T6MO 21-40 Female GTEX-T6MO-2026 Nerve - tibial PAXgene 0 2 pieces ~6mm d. some interstital fat and focal adherent fat, up to 1mm thick Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0126 Thyroid gland PAXgene 1 2 pieces, ~12x6mm. Focal lymphocytic thyroiditis (encircled), not diffuse enough to be Hashimoto's Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0226 Mammary tissue (breast) PAXgene 0 2 pieces ~12x6mm. No visible ductal elements, fibro-adipose tissues only. Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0326 Esophagus - mucosa PAXgene 1 6 pieces ~8x2.5mm. Squamous mucosa is ~10-20% of thickness; occasional sub-mucosal glands noted, encircled. Focal chronic inflammation ensquared. Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0426 Esophagus - muscularis PAXgene 1 6 pieces ~8x3mm Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0526 Stomach PAXgene 1 6 pieces, ~10x4mm. Mucosa well- preserved, ~20-25% of thickness. Surface hemorrhage/erosions ? etiology. Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0626 Colon, transverse PAXgene 1 6 pieces ~9x3mm. Mucosa remarkably well-preserved, ~10% of thickness Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0726 Urinary bladder PAXgene 2 5 pieces fragmented, ~8x4mm. Urothelium partly sloughed but better preserved than typical, <1% of thickness Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0826 Prostate PAXgene 1 2 pieces, not prostate but seminal vesicle Unacceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-0926 Testis PAXgene 1 2 pieces ~8x8mm. Better preserved than usual, spermatogenesis present but appears slightly reduced Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-1026 Skin, leg PAXgene 0 6 pieces, ~6x2.5mm. Squamous epithelium is ~2-3% of thickness. Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-1126 Adipose tissue PAXgene 0 2 pieces ~10x5mm Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-1226 Artery - tibial PAXgene 0 2 pieces ~5mm d. Excellent clean specimens; one aliquot with small branch arteries, encircled, suitable for analysis. Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-1326 Nerve - tibial PAXgene 0 2 pieces, ~4.5-5mm d. Excellent clean specimens, minimal fat. Acceptable View Image
GTEX-TKQ1 21-40 Male GTEX-TKQ1-1426 Muscle, skeletal PAXgene 0 2 pieces ~10x7mm, <5% interstital fat Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0126 Spleen PAXgene 1 2 pieces ~10x8mm Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0226 Thyroid gland PAXgene 1 2 pieces ~10x9mm. Patch Hashimoto's thyroiditis, regressive areas noted Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0326 Heart PAXgene 1 2 pieces ~10x8mm. Minimal ischemic damage Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0426 Coronary artery PAXgene 1 2 pieces ~3mm. Minimal atherosclerosis Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0526 Lung PAXgene 2 2 pieces ~8x8mm. Atalectatic, focal lymphoid follicle/intrapulmonary lymph node noted, encircled Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0626 Aorta PAXgene 1 6 pieces ~9x1.5mm. Minimal atherosis Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0726 Pancreas PAXgene 3 2 pieces ~9x8mm. Marked autolysis & saponification. Islets seen; one encircled, all badly autolyzed Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0826 Urinary bladder PAXgene 3 6 pieces ~7x5mm. Urothelium largely sloughed; a few residual foci up to ~80 microns thick Acceptable View Image
GTEX-U3ZH 21-40 Male GTEX-U3ZH-0926 Prostate PAXgene 1 2 pieces ~7x6mm. Largely peripheral stroma/fat, adherent smooth muscle, minimal autolyzed glandular elements Acceptable View Image