GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, abundant lymphoid aggregates (rep delineated) are 50-60% of tissue
|
Acceptable
|
|
GTEX-183FY
|
21-40
|
Male
|
GTEX-183FY-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, abundant well preserved lymphoid/Peyer aggregates are ~50% total tissue
|
Acceptable
|
|
GTEX-183WM
|
61-70
|
Female
|
GTEX-183WM-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, totally autolyzed, inadquate lymphoid aggregates to warrant analysis
|
Unacceptable
|
|
GTEX-18464
|
51-60
|
Male
|
GTEX-18464-2526 |
Ileum
|
PAXgene |
3
|
4 pieces; predominantly autolyzed mucosa with few residual foci of lymphoid tissue, submucosa
|
Unacceptable
|
|
GTEX-18465
|
51-60
|
Male
|
GTEX-18465-2526 |
Ileum
|
PAXgene |
2
|
4 pieces; several lymphoid nodules in varying states of preservation [annotated] amongst autolyzed mucosa; too dispersed for usual tissue analysis, better for LCM
|
Acceptable
|
|
GTEX-18A66
|
61-70
|
Male
|
GTEX-18A66-2526 |
Ileum
|
PAXgene |
2
|
4 pieces, lymphoid aggregates are ~30% total tissue, rep delineated
|
Acceptable
|
|
GTEX-18A67
|
51-60
|
Male
|
GTEX-18A67-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; no typical ileum and no lymphoid aggregates; Brunner-type glands (outlined); could be distal part of duodenum
|
Unacceptable
|
|
GTEX-18A6Q
|
61-70
|
Male
|
GTEX-18A6Q-2426 |
Ileum
|
PAXgene |
3
|
5 pieces, mucosa, trace lymphoid cells, no aggregates
|
Unacceptable
|
|
GTEX-18A7A
|
51-60
|
Female
|
GTEX-18A7A-2026 |
Ileum
|
PAXgene |
2
|
2 pieces; 1 small [0.3 mm] lymphoid nodule in autolyzed mucosa; LCM
|
Unacceptable
|
|
GTEX-18A7B
|
61-70
|
Male
|
GTEX-18A7B-2126 |
Ileum
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, minimal lymphoid tissue; muscularis propria present
|
Unacceptable
|
|
GTEX-18D9A
|
21-40
|
Female
|
GTEX-18D9A-1226 |
Ileum
|
PAXgene |
1
|
5 pieces; preserved mucosa but no lymphoid nodules
|
Unacceptable
|
|
GTEX-18D9B
|
61-70
|
Male
|
GTEX-18D9B-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa with good lymphoid tissue on 3 pieces, but muscularis is on all 6; LCM
|
Unacceptable
|
|
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, correct target but insufficient target lymphoid aggregates for analysis
|
Unacceptable
|
|
GTEX-18QFQ
|
21-40
|
Male
|
GTEX-18QFQ-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; good lymphoid component, single non-caseating granuloma (marked)
|
Acceptable
|
|
GTEX-19HZE
|
61-70
|
Female
|
GTEX-19HZE-2826 |
Ileum
|
PAXgene |
3
|
4 pieces; totally autolyzed & contains muscle
|
Unacceptable
|
|
GTEX-1A32A
|
51-60
|
Female
|
GTEX-1A32A-2526 |
Ileum
|
PAXgene |
3
|
4 pieces; lymphoid tissue present but too autolyzed for study
|
Unacceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0926 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa with insufficient lymphoid tissue to warrant analysis
|
Unacceptable
|
|
GTEX-1A3MW
|
61-70
|
Female
|
GTEX-1A3MW-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; lymphoid tissue autolyzed
|
Unacceptable
|
|
GTEX-1A3MX
|
61-70
|
Male
|
GTEX-1A3MX-2826 |
Ileum
|
PAXgene |
3
|
6 pieces, autolyzed mucosa; insufficient target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1A8FM
|
51-60
|
Female
|
GTEX-1A8FM-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; lymphoid tissue is more diffuse than nodular [marked]; well dissected
|
Acceptable
|
|
GTEX-1A8G6
|
61-70
|
Male
|
GTEX-1A8G6-2326 |
Ileum
|
PAXgene |
2
|
6 pieces, glandular elements with advanced autolysis but lymphoid aggregates (rep delineated) are ~25-30% of tissue
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-2126 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with muscularis and residual fat (not target)
|
Unacceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; no lymphoid tissue; full thickness of wall
|
Unacceptable
|
|
GTEX-1AMFI
|
51-60
|
Female
|
GTEX-1AMFI-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved mucosa, few well preserved target lymphoid aggregates encircled, ~5% total
|
Acceptable
|
|
GTEX-1AX8Y
|
41-50
|
Male
|
GTEX-1AX8Y-1726 |
Ileum
|
PAXgene |
1
|
6 pieces; fragments of mucosa with good, but variable, lymphoid tissue, few with residual muscularis (not target)
|
Unacceptable
|
|