GTEX-13OVL
|
41-50
|
Male
|
GTEX-13OVL-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa, thick fatty submucosa, preserved thin muscularis
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-1426 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, unusually markedly autolyzed; squamous mucosa totally sloughed; submucosal mucus glands prominent, rep. delineated
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-1626 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion, markedly autolyzed
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces, severe autolysis/saponfication. Evidence of remote pancreatitis; ~50% fat. Islets not visible
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-1826 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.9mm, but completely autolyzed
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-1926 |
Adrenal glands
|
PAXgene |
3
|
3 pieces, ~40% adherent fat, delineated. All cortex only, advanced autolysis
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-2026 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present; all sections with advanced autolysis
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-2426 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular elements with advance autolysis; prostatic abscesses with abundant polymorphonuclear leukocytes distending many lumina, rep delineated
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa moderately-markedly autolyzed, ~0.3mm, ~10-15% thickness
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-2726 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosal epithelium totally autolyzed; ~50% tissue is residual lymphoid aggregates, rep delineated, fairly well preserved
|
Acceptable
|
|
GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-1026 |
Spleen
|
PAXgene |
3
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-1226 |
Pancreas
|
PAXgene |
3
|
2 pieces, advanced autolysis/saponification; Islets not well visualized; ~30% adherent fat, delineated
|
Acceptable
|
|
GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-2226 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.7mm, ~30% thickness, generally advanced autolysis; few better preserved sections encircled, closer to score '2'
|
Acceptable
|
|
GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa is ~0.3mm but with advanced autolysis
|
Acceptable
|
|
GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, advanced autolysis; ~20% total are lymphoid aggregates reasonably well preserved, best for TMA/LCM studies
|
Acceptable
|
|
GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-2626 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, all sections have glomeruli, tubules with advanced autolysis
|
Acceptable
|
|
GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-2826 |
Prostate
|
PAXgene |
3
|
2 pieces glandular hyperplastic pattener; glandular epithelium with advanced autolysis
|
Acceptable
|
|
GTEX-13OW8
|
61-70
|
Male
|
GTEX-13OW8-1126 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis
|
Unacceptable
|
|
GTEX-13OW8
|
61-70
|
Male
|
GTEX-13OW8-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness with severe mucosal autolysis
|
Acceptable
|
|
GTEX-13PDP
|
61-70
|
Male
|
GTEX-13PDP-2126 |
Pancreas
|
PAXgene |
3
|
2 pieces
|
Acceptable
|
|
GTEX-13PDP
|
61-70
|
Male
|
GTEX-13PDP-2426 |
Stomach
|
PAXgene |
3
|
6 pieces; full thickness sections, mucosa is severely autolyzed
|
Acceptable
|
|
GTEX-13PDP
|
61-70
|
Male
|
GTEX-13PDP-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; fragments of autolyzed mucosa and muscularis (not target) with no significant residual lymphoid tissue (target)
|
Unacceptable
|
|
GTEX-13PDP
|
61-70
|
Male
|
GTEX-13PDP-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, mucosa (3), muscularis (2)
|
Acceptable
|
|
GTEX-13PL6
|
41-50
|
Female
|
GTEX-13PL6-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.25 mm, ~20% thickness, glandular component totally autolyzed
|
Acceptable
|
|
GTEX-13PL6
|
41-50
|
Female
|
GTEX-13PL6-1926 |
Ileum
|
PAXgene |
3
|
4 pieces, glandular elements completely autolyzed; residual lymphoid aggregates are ~10-20% of tissue, optimal for TMA/LCM
|
Acceptable
|
|