GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces 18x9 & 14x6 mm
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces up to 7.7x3.5 mm; hyperemia and red cell casts
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2026 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces up to 9x8 mm; one piece has 40% cortex other has 10% cortex; hyperemia and red cell casts;
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0126 |
Testis
|
PAXgene |
2
|
2 ~8.5x6mm aliquots. Spermatogenesis diffusely reduced/arrested
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0826 |
Lung
|
PAXgene |
2
|
2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1626 |
Spleen
|
PAXgene |
2
|
2 ~ 7.5x7.0mm aliquots; red pulp especially poorly preserved
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1826 |
Urinary bladder
|
PAXgene |
2
|
6 ~8.5x4mm pieces. Urothelium is <1% of thickness, partly sloughed; some areas of cystitis cystica/ reactive changes
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1926 |
Colon, transverse
|
PAXgene |
2
|
6 ~ 9x3/5mm pieces. Mucosa generally well-preserved, some autolysis superficially, is ~10% of thickness
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1226 |
Stomach
|
PAXgene |
2
|
6 pieces up to ~7x5 mm; mucosa largely autolyzed; focal mucosal surface hemorrhages
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0226 |
Spleen
|
PAXgene |
2
|
2 ~7.5x5.5mm aliquots
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0326 |
Aorta
|
PAXgene |
2
|
6 ~9x1.5mm pieces, most with a 0.5mm layer of peri-aortic fat
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0426 |
Liver
|
PAXgene |
2
|
2 ~9x7mm aliquots. End-stage cirrhosis with marked bile stasis + steatosis.
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0526 |
Esophagus - mucosa
|
PAXgene |
2
|
6 ~4x2mm pieces, only trace mucosa, less than 5% of thickness
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-0826 |
Adrenal glands
|
PAXgene |
2
|
2 ~12x10mm aliquots. ~40% peripheral fat
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1326 |
Brain - cerebellum
|
PAXgene |
2
|
4 ~6x5mm aliquots
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2426 |
Kidney - cortex
|
PAXgene |
2
|
6 7x3.5mm pieces, tubules badly autolyzed
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2726 |
Kidney - medulla
|
PAXgene |
2
|
2 ~9x8mm aliquots. One medulla, one cortex, tubules badly autolyzed
|
Unacceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1326 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 9x5 mm; focal mucosal slough; moderate tissue tears;
|
Acceptable
|
|
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0126 |
Spleen
|
PAXgene |
2
|
2 8x6mm aliquots
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-0826 |
Liver
|
PAXgene |
2
|
2 ~9x8mm aliquots, areas of chronic passive congestion
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1126 |
Adrenal glands
|
PAXgene |
2
|
2 ~9x8mm aliquots; one is ~85% fat; cannot be used; unable to monitor corresponding aliquot
|
Unacceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1226 |
Pituitary gland
|
PAXgene |
2
|
10x5mm aliquot with 3.5x2mm portion of neuohypophysis appended
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1325 |
Brain - cerebellum
|
PAXgene |
2
|
4 ~6x5mm aliquots
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1426 |
Brain - cortex
|
PAXgene |
2
|
3 ~7x3 mm aliquots; 1 ~4x1.5mm aliquot; 1 ~3.5x3.5mm fragment of dura
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1526 |
Thyroid gland
|
PAXgene |
2
|
2 ~8x7mm aliquots. Suspect malignancy, ?follicular variant of papillary carcinoma, pending glass review. Autolysis hampers analysis
|
Unacceptable
|
|