GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-1526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces up to 6x3 mm; all cortex; no underlying chronic renal lesions
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-1626 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces 9x6 & 6x6 mm; all medulla, no cortex, many red cell casts
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x2 mm; slight autolysis of glands; epithelium fine
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 8x3 mm; good clean muscular specimens
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-1926 |
Stomach
|
PAXgene |
2
|
6 pieces up to 10x2.5 mm;
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-2026 |
Thyroid gland
|
PAXgene |
2
|
2 pieces 6x5 & 7x6 mm;
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-2126 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces 10x8 & 10x7 mm; gynecomastia with ~50-60% fibrous tissue containing ducts and the remainder adipose
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 7x4 mm; mucosa completely autolyzed, muscle moderately autolyzed
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-2326 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces up to 4x4 mm; 2 pieces have meninges attached
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-2426 |
Brain - cortex
|
PAXgene |
2
|
4 pieces up to 4x4 mm; one piece has meninges and vessels in a sulcus
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-2526 |
Pituitary gland
|
PAXgene |
2
|
1 piece 5x5 mm; anterior
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, ~8x7mm.
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces, ~8x8mm, Islets of Langherhans viislble, encircled
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0326 |
Fallopian tube
|
PAXgene |
1
|
2 pieces fallopian tube not ovary, may be used once label corrected
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0426 |
Ovary
|
PAXgene |
1
|
2 pieces ovary not fallopian tube, may be used once label corrected
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0526 |
Aorta
|
PAXgene |
1
|
6 pieces, ~8x1mm, no visible atherosclerosis.
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0626 |
Urinary bladder
|
PAXgene |
2
|
6 pieces, ~ 6x4mm, urothelium partly sloughed, <2% of thickness when present
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0726 |
Cervix - ectocervix
|
PAXgene |
1
|
6 pieces, ~ 8x6mm both endo and ectocervial mucosa, well preserved, representative endocervical glands encircled
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0826 |
Cervix - endocervix
|
PAXgene |
1
|
6 pieces, ~8x5mm, no glands
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0926 |
Stomach
|
PAXgene |
1
|
6 pieces, ~8x3mm mucosa well preserved, ~30-40% thickness
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1026 |
Urinary bladder
|
PAXgene |
2
|
6 pieces mucosa, ~ 6x3mm sloughed mucosa: not vagina but additional bladder. May be used as such when relabled
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces `9x3mm, partially detached mucosa, `10% of thickness
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces ~8x6mm, focal areas of active Hashimoto's thyroiditis, areas of fibrous regression and scarring
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, ~5x2.5mm, squamous mucosa is ~5-10% thickness
|
Acceptable
|
|
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~ 7x2.5mm
|
Acceptable
|
|