GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x3 & 4x2mm. Sclerotic. calcified. one >60% occluded by plaque
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0726 |
Heart
|
PAXgene |
1
|
2 pieces, 8x7 & 9.5x8mm; good specimen
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 11x8 & 10x9mm; slight edema
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-0926 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 9x2mm; no sclerosis; minimal extraneous adventitial tissue
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 8x3mm; all muscle; well preserved neurons
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 9x2mm; mild chronic inflammation, good squamous mucosa
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 10x3.5mm; all muscle as targeted
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1326 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 6x3mm; mucosa and submucosa, no muscularis
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1426 |
Omentum
|
PAXgene |
1
|
2 pieces, 12x9.5 & 12x8mm; well fixed
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, 13x10 & 13x12mm; All adipose tissue, no adrenal tissue
|
Unacceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1626 |
Kidney - cortex
|
PAXgene |
2
|
7 pieces, up to 9x2mm; arteriolar and glomerular sclerosis consistent with diabetes; ~80% glomeruli are scarred; one piece and half of another piece are medulla
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 9.5x2mm; autolysis ranges from moderate to severe
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x2mm; virtually all muscle as targeted; minute focal mucosa in 2 pieces
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1926 |
Ileum
|
PAXgene |
2
|
6 pieces, up to 10.5x1.5mm; sparse lymphoid nodules, moderately autolyzed; totally autolyzed glands; mucosa and submucosa as targeted, no muscularis
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2026 |
Ovary
|
PAXgene |
1
|
2 pieces, 12x9 & 12x11mm; numerous c. albicans, some follicles
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2126 |
Uterus
|
PAXgene |
2
|
2 pieces, 9x8 & 12x8mm; endometrium in one piece, not in other
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2226 |
Vagina
|
PAXgene |
1
|
6 pieces, up to 9x3mm; moderate chronic inflammation; >60% sloughed epithelium; good mucosa in 1 piece
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 13x9 & 11x6mm; atrophic glands in fibroadipose tissue
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2426 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, up to 9x6mm; parakeratotic lip surface on all pieces; 4 glands in one piece, one gland in 1 piece, no gland in one piece with duct; glands are 0.7 to 1.5 mm across; 80% is lip epithelium and stroma
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2526 |
Skin, suprapubic
|
PAXgene |
1
|
7 pieces, up to 10.5x3.5mm; most subcutaneous adipose trimmed; 1 piece has <1mm adipose
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 16x9 & 11x9mm; 20% fibroadipose, rest is adipose
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2726 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 11x8 & 11x6mm; <5% internal adipose
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 9x5 & 8x5.5mm; 1 with 60% external adipose; 1 with 40% external adipose
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-2926 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 5x1 & 5x3.5mm; heavily calcified; half of 1 piece without lesion
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-3026 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 8x3mm; subcutaneous adipose well trimmed
|
Acceptable
|
|