GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0226 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion, 1 piece includes portion of capsule
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; up to 7 hair follicles; ~5 - 10%internal/external fat
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0426 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 3 mm in diameter micronodule (outlined); focal interstitial fibrosis; a few lymphoid aggregates (arrowed)
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0526 |
Lung
|
PAXgene |
1
|
2 pieces; anthracotic pigment (arrowed); some emphysematous change; congestion
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous epithelium ~345 to 414 um in thickness; well trimmed
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected target muscularis; one piece contains ~20% fibrofatty submucosa
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0926 |
Pancreas
|
PAXgene |
1
|
2 pieces; 10% and 30% external/internal fat; mild periductal and interstitial fibrosis; islets present (rep.outlined)
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1026 |
Omentum
|
PAXgene |
1
|
2 fragmented pieces of lobulated mature adipose tissue with septal vessels
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1126 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and lymphoid aggregates in 4 of 6 samples (arrows)
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1226 |
Stomach
|
PAXgene |
1
|
6 pieces; essentially well preserved mucosa and muscularis
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; autolysis within the most superficial mucosa; otherwise preserved mucosa and muscularis
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with preserved colonic mucosa in all pieces
|
Unacceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 40% and 25% fibroadipose tissue and dense fibrous stroma with ductal structures suggestive of gynecomastoid stromal and ductal hyperplasia
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1626 |
Prostate
|
PAXgene |
2
|
2 pieces; focally moderate (grade 2) autolysis; fibromuscular stroma and glandular structures with numerous corpora amylacea, ~50% of 1 piece is seminal vesicle
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1726 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; each is ~20-30% salivary gland, the remainder is fibrofatty stroma, nerve, and skeletal muscle
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1826 |
Testis
|
PAXgene |
1
|
2 pieces; decreased spermatogenesis, thickening of tubular basement membrane, interstitial fibrosis and focal sclerosis of tubules (arrow)
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1926 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue with ~20and 30% dense fibroconnective tissue, nerve, and vessels
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-2026 |
Skin, leg
|
PAXgene |
1
|
6 pieces; ~34um thick epidermis; insignificant amount of internal/external fat except one piece containing ~10% of external fat (outlined)
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-2126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; ~10% internal fat, scattered atrophic fibers and interspersed degenerating myocytes (?rhabdomyolysis)
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-2226 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; no plaque formation, small focus of medial calcification
|
Acceptable
|
|
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-2326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; ~5-10% external/internal fat
|
Acceptable
|
|
GTEX-1B933
|
51-60
|
Female
|
GTEX-1B933-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, squamous epithelium is ~40 microns, no adherent dermal fat.
|
Acceptable
|
|
GTEX-1B933
|
51-60
|
Female
|
GTEX-1B933-0226 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat
|
Acceptable
|
|
GTEX-1B933
|
51-60
|
Female
|
GTEX-1B933-0326 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat
|
Acceptable
|
|