GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose tissue, no ductal elements
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2126 |
Testis
|
PAXgene |
2
|
1 piece, moderate/severe autolysis. spermatogenesis appears present but reduced
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2226 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, squamous epithelium is ~40 microns; subcutaneous adherent fat up to ~2.5mm, rep. delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2326 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa moderate autolyzed, up to ~0.6mm, ~30% thickness
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2426 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces glandular tissue ~20% tissue, rest stroma/mucosa. Recommend use for TMA/LCM studies
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2526 |
Skin, leg
|
PAXgene |
0
|
6 pieces, adherent fat up to ~1mm, rep. delineated; squamous epithelium ~50 microns
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10-20% fibrovascular tissue intermingled, rep delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, generally clean specimens, nubbin of ahderent fat up to ~0.5mm, delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, adherent fat up to ~2mm delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-3026 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, fragmented. No abnormalities
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-3126 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, one cortex, one cerebellum, encircled--beware upon sampling
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-3226 |
Pituitary gland
|
PAXgene |
1
|
1 piece, ~30% dura (delineated)--rest is adenohypophysis
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; mostly cortex; 20% external fat;
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0226 |
Spleen
|
PAXgene |
1
|
2 pieces; well preserved, non-congested
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0326 |
Skin, suprapubic
|
PAXgene |
0
|
4 pieces; well trimmed; <5% intradermal fat; focus of lymphoid carry-over artifact [annotated]
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0426 |
Lung
|
PAXgene |
1
|
2 pieces; 60 & 50% bronchopneumonia; patchy emphysema
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0526 |
Aorta
|
PAXgene |
1
|
6 pieces; thick fibroadipose adventitia (1 mm)
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; extensive atherosclerotic calcified plaques; <25% muscle
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0726 |
Heart
|
PAXgene |
1
|
2 pieces; nuclear enlargement, contraction bands
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1 with 60% internal & external fat; other <5% fat
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces, fragmented; 20% external fat on 1
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-1126 |
Omentum
|
PAXgene |
0
|
several fragmented pieces
|
Acceptable
|
|
GTEX-13CF3
|
61-70
|
Female
|
GTEX-13CF3-1226 |
Ileum
|
PAXgene |
1
|
6 pieces; only 2 lymphoid nodules [annotated]
|
Acceptable
|
|