GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2126 |
Prostate
|
PAXgene |
1
|
2 pieces 8x6 & 7.5x6 mm; both contain prostatic urethra at one edge and are largely muscular; 1 has about 10% prostatic glands
|
Acceptable
|
|
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2226 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8.6x5 mm; epithelium totally sloughed; muscle wall in good shape
|
Acceptable
|
|
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 6.7x2 mm; mucosa almost totally autolyzed; muscle slight to moderate fragmentation
|
Acceptable
|
|
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2426 |
Stomach
|
PAXgene |
2
|
6 pieces up to 9x2.6 mm; variable mucosal preservation: overall superficial autolysis, several areas of full thickness autolysis; several pieces with sectioning artifacts
|
Acceptable
|
|
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2526 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces ~5 mm cubed, 1 piece fragmented
|
Acceptable
|
|
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2626 |
Brain - cortex
|
PAXgene |
1
|
4 pieces ~5x3 mm;
|
Acceptable
|
|
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2726 |
Pituitary gland
|
PAXgene |
1
|
1 piece 5x5 mm anterior pituitary
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0126 |
Lung
|
PAXgene |
1
|
2 pieces, 8x6 & 6x6; several dilated air spaces
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 11x5 & 9x7 mm;
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0326 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 6x4 mm; excellent specimen
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0426 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces up to 7x3 mm;
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0526 |
Stomach
|
PAXgene |
1
|
6 pieces up to 8x5 mm; well preserved oxyntic mucosa with slight surface sloughing
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 11x10 & 10x10 mm; 50 & 70% adipose tissue; abundant lobular and ductal components; unfixed central areas in adipose tissue
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0726 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 8x5 mm; surface focally present in 5 of 6 pieces (maximum length 3.7 mm)
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0826 |
Ovary
|
PAXgene |
1
|
2 pieces, 10x8 & 9x8 mm; numerous ova and follicles present
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-0926 |
Fallopian tube
|
PAXgene |
0
|
2 pieces, 9x5 & 7x4 mm; tube comprises ~20-30% of specimens
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1026 |
Uterus
|
PAXgene |
1
|
2 pieces, 10x9 & 9x8 mm; no glands present
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1126 |
Cervix - endocervix
|
PAXgene |
0
|
2 pieces, 7x7 & 7x6 mm; 1 piece is endocervix; other has no epithelium
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1226 |
Cervix - endocervix
|
PAXgene |
0
|
2 pieces, 9x6 & 8x7 mm; 1 piece with squamous high grade dysplasia (11 mm in length); 1 piece without epithelium;
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 7.6x8.7 mm; surface partially sloughed
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1426 |
Vagina
|
PAXgene |
0
|
6 pieces up to 9x5 mm; excellent preservation
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1526 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x3.4 mm;
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 15x12 & 10x8 mm; large central defects especially in larger piece
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 11x9 & 9x6 mm; minimal adipose interspersed
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~1.6 mm in diameter; 60 & 40% adjacent adipose and fibrous stroma
|
Acceptable
|
|