|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 8.5x5 & 8x5mm; both ~40-50% fibrous tissue; no ductal elements seen
|
Acceptable
|
 |
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 9x8 & 11x8mm; embedded ~0.5mm vessel, foci of fibrous tissue
|
Acceptable
|
 |
|
GTEX-XYKS
|
61-70
|
Female
|
GTEX-XYKS-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 8x4mm; 3 muscularis only; 2 mucosa only; 1 fibromuscular tissue
|
Acceptable
|
 |
|
GTEX-XYKS
|
61-70
|
Female
|
GTEX-XYKS-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 11x9 & 11x9mm; ducts, no lobules, atrophic
|
Acceptable
|
 |
|
GTEX-XYKS
|
61-70
|
Female
|
GTEX-XYKS-2326 |
Ileum
|
PAXgene |
2
|
3 pieces, up to 11x7.5mm; duodenum, not ileum (contains Brunner glands) no lymphoid tissue; full thickness wall rather than mucosa
|
Unacceptable
|
 |
|
GTEX-XYKS
|
61-70
|
Female
|
GTEX-XYKS-2726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 12x11 & 11x8mm; 1 has ~15% nerve and blood vessels
|
Acceptable
|
 |
|
GTEX-XYKS
|
61-70
|
Female
|
GTEX-XYKS-2826 |
Vagina
|
PAXgene |
1
|
6 pieces, up to 9.5x5.5mm; 3 have vagina, 3 have only fibrofatty tissue. The epithelium makes up only 2% of the specimen's thickness in most vaginal specimens (as in this one). The rest is fibromuscular stroma.
|
Acceptable
|
 |
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 11x7 & 12x8mm;
|
Acceptable
|
 |
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1126 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 7x2.5mm. Up to 1 mm thick hemorrhagic adipose tissue in adventitia.
|
Acceptable
|
 |
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1926 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 10x9 & 12x8mm; smaller piece is 60% fibroadipose tissue
|
Acceptable
|
 |
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-2026 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces, 7x6 & 12x7mm; several ducts in smaller piece.
|
Acceptable
|
 |
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-2226 |
Ileum
|
PAXgene |
2
|
6 pieces, up to 9x3mm; lymphoid tissue abundant (autolysis=2); mucosa autolyzed=3; all pieces have abundant muscularis (not the target)
|
Acceptable
|
 |
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 11x7 & 7x5.5mm; 1mm colloid cyst in one aliquot, delineated. 2x1mm focus of fibrous tissue in other aliquot, delineated
|
Acceptable
|
 |
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 12x11 & 13x12mm; atrophic TDLUs in one, delineated
|
Acceptable
|
 |
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 11x7.5 & 9.5x8mm;
|
Acceptable
|
 |
|
GTEX-Y3I4
|
51-60
|
Male
|
GTEX-Y3I4-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 8x5mm; 3/6 with mucosa, well-preserved, lymphoid aggregates visible, ~10% total tissue
|
Acceptable
|
 |
|
GTEX-Y3I4
|
51-60
|
Male
|
GTEX-Y3I4-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 13x11 & 12x10.5mm; mainly fat, ~10% fibrous tissue, rep areas delineated. No TDLU
|
Acceptable
|
 |
|
GTEX-Y3I4
|
51-60
|
Male
|
GTEX-Y3I4-2226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 12x9 & 9x8mm; ~10-15% fibrous tissue, delineated (rep areas )
|
Acceptable
|
 |
|
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 13x12 & 13x11mm. Scattered small collections of ducts and lobules. Large central (adipose?) empty, unfixed.
|
Acceptable
|
 |
|
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 15x12 & 12x11mm. 2525 composed of adipose tissue, centrally unfixed. Apparently switched with 2625
|
Acceptable
|
 |
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces. 16x9 & 14x6mm; Ducts and lobules present. Larger piece good; smaller is mainly adipose.
|
Acceptable
|
 |
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2026 |
Adipose tissue
|
PAXgene |
1
|
2 pieces. 12x9.5 & 12.5x11mm;
|
Acceptable
|
 |
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 16x13 & 17x12mm; mainly fibroadipose tissue, a few atrophic ductal elements noted, rep ones delineated
|
Acceptable
|
 |
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-2226 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, 16x10 & 18x9mm; largely squamous mucosa (inner lip) and stroma, minute glands are <5% tissue volume
|
Unacceptable
|
 |
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-2426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 12x11 & 15x7.5mm; ~19% fibrous tissue, delineated
|
Acceptable
|
 |