NIH, National Cancer Institute, Division of Cancer Treatment and Diagnosis (DCTD) NIH - National Institutes of Health National Cancer Institute DCTD - Division of Cancer Treatment and Diagnosis

GTEx Histological Images

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Case ID Age Gender Specimen ID Tissue Type Fixative Autolysis Pathology Review Comments Acceptability Action
GTEX-QLQW 21-40 Male GTEX-QLQW-0426 Colon, transverse PAXgene 1 6 pieces up to 8x3 mm; ~540um thick mucosa; muscularis propria on 4 pieces Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-0526 Esophagus - mucosa PAXgene 1 6 pieces up to 6.7x2.8 mm’ 3 pieces with hyperplastic squamous epithelium, 2 with fundic-type glandular epithelium; 1 with glandular and squamous epi.; probable reflux changes; no intestinal metaplasia Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-0626 Esophagus - muscularis PAXgene 0 6 pieces up to 8.7x4.3 mm Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-0726 Stomach PAXgene 1 6 pieces up to 7x2 mm; good oxyntic mucosa on all, up to 0.8 mm; foveolar surface largely sloughed Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-0826 Urinary bladder PAXgene 1 6 pieces up to 7 x2.7 mm; good mucosa; muscle in one piece; edematous stroma Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-0926 Prostate PAXgene 1 2 pieces ~9x9mm each; no significant hyperplasia Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1026 Testis PAXgene 1 2 pieces 14x7 & 9x12 mm; spermatogenesis present Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1126 Skin, leg PAXgene 1 6 pieces up to 9x3 mm; epidermis 66um thick Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1226 Adipose tissue PAXgene 1 2 pieces ~12x7 & 9x9 mm; up to 10% centrally empty (unfixed or fractured) Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1326 Muscle, skeletal PAXgene 1 2 pieces: 15x11 & 9.5x9.5 mm; ~5% internal fat Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1426 Nerve - tibial PAXgene 1 2 pieces ~3x1.5, & 2x2 mm; embedded in ~30% stroma & fat Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1526 Artery - tibial PAXgene 1 2 pieces ~3x2 mm; 2 arteries and 1 vein; tissue tears (histologic); embedded in ~40% stroma Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1626 Kidney - cortex PAXgene 1 6 pieces, ~6x2.5 mm; numerous red cell casts Acceptable View Image
GTEX-QLQW 21-40 Male GTEX-QLQW-1726 Kidney - cortex PAXgene 1 2 pieces ~7.5x6 mm; cortex, not medulla, except for 10% of 1 piece; numerous red cell casts Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0126 Spleen PAXgene 2 2 8x6mm aliquots Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0226 Pancreas PAXgene 1 2 ~7x6mm aliquots, good clean specimens with no peripancreatic fat; ~5% interstitial fat/fibrous tissue Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0326 Aorta PAXgene 0 6 ~10x1.5mm pieces, a few with adherent layer of ~0.5mm fibrous tissue on serosal edges Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0426 Esophagus - mucosa PAXgene 0 6 ~5x4mm pieces. Non keratinizing squamous mucosa is ~10-20% of thickness Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0526 Esophagus - muscularis PAXgene 0 6 ~6x4mm pieces Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0626 Stomach PAXgene 1 6 ~6x4mm pieces; mucosa well-preserved, ~25% of thickness in most pieces Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0726 Thyroid gland PAXgene 0 2 ~9x8mm aliquots, one with ~1.5mm layer of peripheral fat along one edge Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0826 Colon, transverse PAXgene 1 6 ~7.5x3mm pieces; mucosa well-preserved, ~15-40% of thickness Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-0926 Urinary bladder PAXgene 1 6 8x4.5mm pieces. Urothelium reasonably well-preserved, 1-2% of thickness. Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-1026 Prostate PAXgene 1 2 ~9.5x7mm aliquots. Glands well-preserved Acceptable View Image
GTEX-QV31 21-40 Male GTEX-QV31-1126 Testis PAXgene 1 2 7x6mm aliquots. Robust spermatogenesis Acceptable View Image