GTEX-16NPX
|
51-60
|
Male
|
GTEX-16NPX-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly muscularis, but 3 of 6 pieces include colonic mucosa
|
Unacceptable
|
|
GTEX-16XZZ
|
61-70
|
Male
|
GTEX-16XZZ-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
|
GTEX-16YQH
|
21-40
|
Male
|
GTEX-16YQH-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, focal adherent fat(delineated)
|
Acceptable
|
|
GTEX-16Z82
|
61-70
|
Male
|
GTEX-16Z82-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; too much submucosal fat, up to 75%
|
Acceptable
|
|
GTEX-178AV
|
41-50
|
Male
|
GTEX-178AV-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, abundant mucosa, not correct target
|
Unacceptable
|
|
GTEX-17EUY
|
21-40
|
Male
|
GTEX-17EUY-1726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; relatively well trimmed with some residual submucosa, mild inflammation in adventitia
|
Acceptable
|
|
GTEX-17EVP
|
41-50
|
Male
|
GTEX-17EVP-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis propria and ~0.9mm submucosa with scattered lymphoid aggregates (outlined)
|
Acceptable
|
|
GTEX-17EVQ
|
61-70
|
Male
|
GTEX-17EVQ-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-17F96
|
61-70
|
Male
|
GTEX-17F96-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected
|
Acceptable
|
|
GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; prominent submucosal fibrous stroma on 3 pieces, up to 40%
|
Acceptable
|
|
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all have mucosa and muscularis; LCM
|
Unacceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, extnesive mucosa, not GTEx target
|
Unacceptable
|
|
GTEX-17F9Y
|
61-70
|
Female
|
GTEX-17F9Y-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces all muscularis
|
Acceptable
|
|
GTEX-17GQL
|
61-70
|
Male
|
GTEX-17GQL-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, mainly muscularis, ~20% 'contaminant' mucosa
|
Acceptable
|
|
GTEX-17HG3
|
21-40
|
Female
|
GTEX-17HG3-1126 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly muscularis, few pieces include residual autolyzed mucosa (marked)
|
Acceptable
|
|
GTEX-17HGU
|
51-60
|
Male
|
GTEX-17HGU-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected
|
Acceptable
|
|
GTEX-17HHE
|
41-50
|
Male
|
GTEX-17HHE-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis. Minute (<0.5mm) focus 'contaminant' mucosa, encircled
|
Acceptable
|
|
GTEX-17HHY
|
51-60
|
Male
|
GTEX-17HHY-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; well dissected target muscle
|
Acceptable
|
|
GTEX-17HII
|
51-60
|
Male
|
GTEX-17HII-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; foci of fibrovascular stroma occupy up to 10%
|
Acceptable
|
|
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, ~5-10% 'contaminant mucosa, rep. delineated
|
Acceptable
|
|
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, well trimmed
|
Acceptable
|
|
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-1226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, ~35% stroma & trace mucosa, delineated
|
Acceptable
|
|
GTEX-183FY
|
21-40
|
Male
|
GTEX-183FY-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|