GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-1926 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, one section is ~60% adherent fat/vessel, delineated. Other may have medualla, but poorly preserved/autolyzed
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2226 |
Ileum
|
PAXgene |
3
|
3 pieces, ~50-60% lymphoid aggregates; mucosal elements largely sloughed/autolyzed
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa (~0.8mm) up to 20-25% thickness but glandular elements markedly autolyzed except for deeper areas
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces mucosa ~ 0.3mm, ~15-20% thickness, but markedly autolyzed glands, largely lamina propria remains
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2526 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular elements markedly autolyzed
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2826 |
Testis
|
PAXgene |
3
|
2 pieces, tubular cells markedly autolyzed
|
Acceptable
|
|
GTEX-13NZA
|
61-70
|
Male
|
GTEX-13NZA-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed, some atrophy and mucinous metaplasia
|
Acceptable
|
|
GTEX-13NZA
|
61-70
|
Male
|
GTEX-13NZA-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, up to 30% attached fat
|
Acceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2626 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa only present: autolyzed
|
Unacceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2726 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; mucosa only present: autolyzed; prominent melanosis coli (good for LCM)
|
Unacceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2826 |
Ileum
|
PAXgene |
3
|
6 pieces; ileal mucosa with insufficient lymphoid tissue for GTEx
|
Unacceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2126 |
Gastroesophageal junction
|
PAXgene |
3
|
6 pieces; 3 gastric and 3 esophageal mucosal specimens
|
Unacceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; no lymphoid tissue
|
Unacceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2526 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; mucosa autolyzed; muscularis intact
|
Acceptable
|
|
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed; muscularis preserved
|
Acceptable
|
|
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-1626 |
Prostate
|
PAXgene |
3
|
3 pieces; glands totally autolyzed, stroma preserved; 1 piece appears to be periprostatic fibrofatty tissue [outlined]
|
Acceptable
|
|
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-2026 |
Colon, transverse
|
PAXgene |
3
|
5 pieces; mucosa autolyzed, muscularis preserved
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-1226 |
Spleen
|
PAXgene |
3
|
2 pieces, moderate congestion, advanced autolysis
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-1926 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, remarkably advanced autolysis, mucosa completely sloughed
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, glandular component of mucosa markedly autolyzed, up to~0.3mm, ~15% thickness
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-2226 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to 1mm, ~40% thickness, but with advanced autolysis
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; glandular component of mucosa markedly autolyzed; residual lymphoid aggregates reasonably preserved, ~40% of tissue, rep delineated
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-2526 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, essentially all cortex but autolysis far advanced
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-2626 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present in all sections, which show advanced autolysis
|
Acceptable
|
|
GTEX-13OVJ
|
51-60
|
Female
|
GTEX-13OVJ-1926 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed
|
Unacceptable
|
|