GTEX-1RQED
|
61-70
|
Male
|
GTEX-1RQED-2226 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, target squamous mucosa up to ~0.15mm, sloughing, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1RQED
|
61-70
|
Male
|
GTEX-1RQED-2426 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderate interstitial fat; moderate saponification. Rare islets still visible but degenerating, rep delineated,
|
Acceptable
|
 |
GTEX-1RQED
|
61-70
|
Male
|
GTEX-1RQED-2826 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates up to ~30%, delineated
|
Acceptable
|
 |
GTEX-1RQED
|
61-70
|
Male
|
GTEX-1RQED-3226 |
Pituitary gland
|
PAXgene |
2
|
1 piece, ~ 10-15% neurohypophysis, delineated, rest adenohypophysis
|
Acceptable
|
 |
GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-2026 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, cortex; adherent fat up to ~10% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, advanced tubular autolysis; glomeruli present
|
Acceptable
|
 |
GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-2326 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion; remote splenitis
|
Acceptable
|
 |
GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-2526 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates are ~30-40% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-2626 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-2826 |
Prostate
|
PAXgene |
2
|
2 pieces, moderate-advanced glandular autolysis, hyperplastic glandular pattern
|
Acceptable
|
 |
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; no lesions; well trimmed
|
Acceptable
|
 |
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1326 |
Spleen
|
PAXgene |
2
|
2 pieces; no congestion; low lymphoid content
|
Acceptable
|
 |
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1426 |
Pancreas
|
PAXgene |
2
|
2 pieces; chronic inflammation, fibrosis and atrophy; 60% fat content
|
Unacceptable
|
 |
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1626 |
Kidney - cortex
|
PAXgene |
2
|
4 pieces; tubules autolyzed, glomeruli intact; no sign of active or chronic disease
|
Acceptable
|
 |
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed on all; muscularis intact
|
Acceptable
|
 |
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2626 |
Vagina
|
PAXgene |
2
|
6 pieces; epithelium largely sloughed
|
Acceptable
|
 |
GTEX-1S82P
|
61-70
|
Female
|
GTEX-1S82P-0426 |
Nerve - tibial
|
PAXgene |
2
|
2 pieces; 30% and 40% internal/external fat
|
Acceptable
|
 |
GTEX-1S82P
|
61-70
|
Female
|
GTEX-1S82P-0626 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; thyroid gland not present instead skeletal muscle tissue with interstitial fibrosis
|
Unacceptable
|
 |
GTEX-1S831
|
21-40
|
Male
|
GTEX-1S831-0126 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces; interstitial lymphocytes (myositis?); small foci of fibrovascular and adipose tissue (outlined)
|
Acceptable
|
 |
GTEX-1S831
|
21-40
|
Male
|
GTEX-1S831-1426 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; trace of external fat (outlined)
|
Acceptable
|
 |
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1126 |
Stomach
|
PAXgene |
2
|
6 pieces; moderate to severe gastric mucosa autolysis; two pieces with trace of muscularis (outlined)
|
Acceptable
|
 |
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1526 |
Ileum
|
PAXgene |
2
|
4 pieces; moderate to severe mucosal autolysis; residual target lymphoid aggregates are ~10% of tissue; non-target muscularis present
|
Unacceptable
|
 |
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-2126 |
Muscle, skeletal
|
PAXgene |
2
|
2 fragmented pieces; well trimmed skeletal muscle
|
Acceptable
|
 |
GTEX-N7MS
|
61-70
|
Male
|
GTEX-N7MS-0926 |
Lung
|
PAXgene |
2
|
OK for analysis
|
Acceptable
|
 |
GTEX-N7MS
|
61-70
|
Male
|
GTEX-N7MS-1526 |
Kidney - medulla
|
PAXgene |
2
|
OK to analyze
|
Acceptable
|
 |