GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2426 |
Uterus
|
PAXgene |
2
|
2 ~8.5x3mm aliquots. Autolyzed, atrophic endometrium is <10% of both.
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2526 |
Vagina
|
PAXgene |
2
|
6 ~7x3mm pieces; squamous mucosa, focally beginning to slough, is ~2-3% of thickness
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2626 |
Cervix - ectocervix
|
PAXgene |
2
|
4 ~6x4mm pieces, 2 with ~ 0.1mm edge of squamous mucosa, 2 with no significant mucosal surface noted.
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2726 |
Cervix - endocervix
|
PAXgene |
2
|
4 ~6x5mm pieces. Only one has a ~3x2mm focus of endocervical glands, partially autolyzed. One has a 3x0.1mm edge of squamous mucosa; the other two lack a mucosal surface.
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2826 |
Urinary bladder
|
PAXgene |
2
|
6 ~8x5mm pieces. Urotherlium nearly completely sloughed; muscularis/adipose tissue is >99% of sections
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2926 |
Brain - cortex
|
PAXgene |
1
|
4 ~6x4mm aliquots. Some have a ~ 0.1mm layer of adherent pia arachnoid
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 ~5x5mm aliquots
|
Acceptable
|
 |
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-3126 |
Pituitary gland
|
PAXgene |
1
|
1 ~ 6x4mm aliquot
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0126 |
Testis
|
PAXgene |
2
|
2 ~7.5x5.5mm aliquots. Mature spermatozoa are evident
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0226 |
Skin, leg
|
PAXgene |
1
|
6 ~7.5x2.5mm pieces. Squamous epithelium is ~1-2% of thickness; several pieces have adherent aggregates of subcutaneous fat up to ~9x2mm.
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0326 |
Adipose tissue
|
PAXgene |
1
|
2 ~8.5x8mm aliquots
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0426 |
Heart
|
PAXgene |
1
|
2 ~8x6.5mm aliquots. Mild ischemic changes. Minute (0.7x0.3mm) fibrous scar)
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0526 |
Lung
|
PAXgene |
2
|
2 ~7x6.5mm aliquots. Diffuse severe congestion/?hemorrhagic pneumonitis
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~10x6mm aliquots; ~5% interstitial adipose tissue in one
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~6x1.2mm pieces; squamous mucosa is ~25-40% of thickness
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0826 |
Esophagus - muscularis
|
PAXgene |
2
|
6 ~7x2mm pieces
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0926 |
Aorta
|
PAXgene |
1
|
6 ~8.5x1.5mm pieces, several with adherent fat/fibrous tissue up to ~5.2mm
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~9x7mm aliquots. No mammary ductal/lobular elements; all adipose, trace skeletal muscle
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1126 |
Nerve - tibial
|
PAXgene |
1
|
2 ~4.3x2.3mm aliquots; peripheral fat is ~10% of specimen (focally ~0.5mm)
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1226 |
Artery - tibial
|
PAXgene |
1
|
2 ~2.3x1.2mm aliquots, good clean specimens
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1326 |
Adrenal glands
|
PAXgene |
2
|
2 ~18x3mm aliquots. Medulla well-visualized, ~15% of specimens, but badly autolyzed.
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1426 |
Kidney - cortex
|
PAXgene |
2
|
6 ~7x3mm pieces. Marked diffuse congestion; abundant glomeruli. Tubules focally are badly autolyzed
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1526 |
Kidney - medulla
|
PAXgene |
3
|
2 ~7.5x7mm aliquots, one pure tubules (medulla), one ~40% cortex with glomeruli. Tubules badly autolyzed
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1626 |
Spleen
|
PAXgene |
3
|
2 ~7x6.5mm aliquots.
|
Acceptable
|
 |
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-1726 |
Pancreas
|
PAXgene |
3
|
2 ~7.5x7mm aliquots. Severe post mortem saponification; about 10% peripheral and interstital adipose tissue
|
Acceptable
|
 |