GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-2126 |
Ileum
|
PAXgene |
2
|
4 pieces, mucosa with moderate-severe autolysis; no target lymphoid aggregates present
|
Unacceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-1526 |
Pancreas
|
PAXgene |
2
|
2 pieces variably autolytic; one with well preserved islets (rep delineated); other with advanced saponification (ensquared)-sample carefully
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-1626 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2126 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, cortex, ~25% adherent/interstitial fibrous tissue, rep delineated
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present; moderate tubular autolysis
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1326 |
Pancreas
|
PAXgene |
2
|
2 pieces; minimal fat content
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1626 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; 90% squamous epithelium sloughed
|
Unacceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1826 |
Prostate
|
PAXgene |
2
|
2 pieces; stroma predominates (90%) over glands; glands autolyzed, stroma intact; 3.5mm 'cap' of fibroadipose vascularized tissue at end of 1 piece
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; tubules mostly affected by autolysis; no sign of chronic disease
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-2226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; cortex; no internal fat; small amount of adherent externa; fat
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-2326 |
Spleen
|
PAXgene |
2
|
2 pieces; focally congested
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa partly autolyzed. muscle intact; well dissected
|
Acceptable
|
 |
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1126 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1mm, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa ~0.3mm, moderate-severe advanced autolysis
|
Acceptable
|
 |
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1926 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis present, appears reduced
|
Acceptable
|
 |
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa; at least 50% of tissue are residual target lymphoid aggregates (outlined)
|
Acceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; 1 piece has 10% fibrous content
|
Acceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-1326 |
Liver
|
PAXgene |
2
|
2 pieces; moderate to severe centrilobular macrovesicular steatosis
|
Acceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces; fat comprises 30 & 50%; some parts are severely autolyzed
|
Acceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-1726 |
Kidney - cortex
|
PAXgene |
2
|
7 pieces; moderate to marked degree of diffuse glomerular sclerosis
|
Acceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; 2 have autolyzed mucosa and intact muscularis; 4 have only muscularis; could be used to compare with muscularis of sigmoid
|
Acceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-2826 |
Vagina
|
PAXgene |
2
|
6 pieces; mucosa largely sloughed; marked chronic inflammation and reactive atypia in remaining epithelium
|
Unacceptable
|
 |
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1826 |
Ileum
|
PAXgene |
2
|
5 pieces, < 1% target lymphoid aggregates present
|
Unacceptable
|
 |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1526 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
 |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1826 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderate-advanced saponification; islets barely visible, advanced degradation
|
Acceptable
|
 |