2 pieces; 10% internal and external fat & fibrous content
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-0826
Coronary artery
PAXgene
1
2 pieces; large calcified atheromatous plaque in larger piece; smaller piece has 0.6 mm external fat collection
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-0926
Heart
PAXgene
1
2 pieces; extensive [30%] fibrous scars in both pieces, consistent with old 1nfarcts
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1026
Aorta
PAXgene
1
6 pieces; no plaques; up to 0.6 mm adventitial fibrous tissue
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1126
Esophagus - mucosa
PAXgene
1
6 pieces; partially sloughed epithelium; foci of chronic esophagitis
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1226
Esophagus - muscularis
PAXgene
1
6 pieces; well trimmed muscle
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1326
Gastroesophageal junction
PAXgene
1
6 pieces; up to 1 mm external fat on 2 pieces
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1426
Thyroid gland
PAXgene
2
2 pieces; focus of atrophy & fibrosis (annotated); small (0.4 mm) lymphoid focus (annotated)
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1526
Testis
PAXgene
1
2 partially fragmented pieces; active spermatogenesis
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1626
Liver
PAXgene
1
2 pieces; large [4 mm] vein in 1 piece; 4 x 0.7 mm fibrous area in other piece
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1726
Spleen
PAXgene
2
2 pieces; marked congestion
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1826
Omentum
PAXgene
0
2 pieces; <5% stromal content
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-1926
Pancreas
PAXgene
2
2 pieces; 10% internal fat in 1 piece
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-2026
Mammary tissue (breast)
PAXgene
1
2 pieces; adipose tissue with no mammary ducts; <5% fibrous content
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-2126
Adrenal glands
PAXgene
2
2 pieces; 10% faat content
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-2226
Kidney - cortex
PAXgene
2
6 pieces; glomeruli in better shape than tubules
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-2326
Stomach
PAXgene
2
6 pieces; chronic gastritis; muscularis better preserved [1] than mucosa
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-2426
Prostate
PAXgene
2
2 pieces; glands severely [3] autolyzed, stroma preserved [1]; scattered skeletal muscle fibers on periphery of both pieces [annotated]
Acceptable
GTEX-18465
51-60
Male
GTEX-18465-2526
Ileum
PAXgene
2
4 pieces; several lymphoid nodules in varying states of preservation [annotated] amongst autolyzed mucosa; too dispersed for usual tissue analysis, better for LCM