GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2026 |
Liver
|
PAXgene |
1
|
2 pieces; <5% macrovesicular steatosis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2126 |
Lung
|
PAXgene |
1
|
2 pieces; patchy fibrosis; pulmonary edema; numerous alveolar macrophages
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2226 |
Prostate
|
PAXgene |
2
|
2 pieces
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2326 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 1 has 50% internal fat; other is fat-free
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; colonic type muscularis propria with 10% external fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; occasional sclerosed glomerulus; moderate arterial sclerosis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2626 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa only present: autolyzed
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2726 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; mucosa only present: autolyzed; prominent melanosis coli (good for LCM)
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2826 |
Ileum
|
PAXgene |
3
|
6 pieces; ileal mucosa with insufficient lymphoid tissue for GTEx
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue without mammary ducts
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces and sliver of meninges all with artefactual bone fragments [labeled]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-3126 |
Brain - cerebellum
|
PAXgene |
2
|
2 pieces; hemorrhage and bone fragments on surface
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-3226 |
Pituitary gland
|
PAXgene |
1
|
1 piece; both anterior and posterior portions represented (annotated)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all cortex
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0226 |
Spleen
|
PAXgene |
1
|
2 pieces, minimal congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, minimal abnormalities
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, minimla atherosis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0526 |
Pancreas
|
PAXgene |
1
|
2 pieces, mainly fat, only ~10% pancreatic parenchyma, delineated
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous mucosa is ~0.5mm, ~10% thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all muscularis, focal adherent fat/serosa, delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, one with adherent fat/serosa, delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-0926 |
Stomach
|
PAXgene |
1
|
6 pieces, excellent speicmen,well preserved mucosa up to 1mm thick, ~70% thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, 10% lymphoid aggregates, delineated, best for LCM or TMA studies
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-1126 |
Prostate
|
PAXgene |
1
|
2 pieces, mainly stromal elements; a few well-preserved glands
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-1226 |
Testis
|
PAXgene |
1
|
2 pieces spermatogenesis present
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |