NIH, National Cancer Institute, Division of Cancer Treatment and Diagnosis (DCTD) NIH - National Institutes of Health National Cancer Institute DCTD - Division of Cancer Treatment and Diagnosis

GTEx Histological Images

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Case ID Age Gender Specimen ID Tissue Type Fixative Autolysis Pathology Review Comments Acceptability Action
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0226 Adrenal glands PAXgene 1 2, ~3x7mm adrenal cortex and medulla, well preserved. 3x0.6mm attached nerve in one Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0326 Aorta PAXgene 1 6 pieces. 10x1.3mm. no fatty deposits. Sparse adherent stroma Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0426 Lung PAXgene 1 2 ~10x7 & 8x7mm pieces. Patchy bronchopneumonia Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0526 Esophagus - mucosa PAXgene 1 6 pieces,~5 mm sq with well preserved epithelium (0.25 mm thick) Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0626 Esophagus - muscularis PAXgene 1 5 pieces, ~9x4.5 mm. well-oriented specimens. Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0726 Pancreas PAXgene 0 2, ~ 10x8 mm pieces,<1% fat; focal fixation fractures Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0826 Stomach PAXgene 1 6 pieces, ~7x4.5mm. Very good mucosal (0.87mm) preservation in 2 pieces; none in others Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-0926 Colon, transverse PAXgene 1 4 pieces, 7x2mm. Good mucosal preservation. Tissue separation with tears Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1026 Urinary bladder PAXgene 1 6 ~10x4.8mm pieces. Well preserved epithelium in 3 pieces; none in other 3. Moderate submucosal edema. Moderate fixation artifacts. Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1126 Prostate PAXgene 1 2 ~10x10 & 9 x 6mm; focal atrophy Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1226 Testis PAXgene 1 2 pieces ~10mm sq; >60% atrophic, sclerotic tubules; remainder with minimal spermatogenesis. Capsule partially present. Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1326 Adipose tissue PAXgene 1 2 pieces, 10.5x8 & 11.5x7 mm. No fixation artifacts. Adherent vessel, 1 x 3 mm Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1426 Skin, leg PAXgene 1 6 ~10x3.7 mm (maximum) pieces. Fragmented dermis in 2 pieces (poor fixation) Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1526 Muscle, skeletal PAXgene 1 2 pieces ~9x8 & 6x7 mm pieces, large areas (>50%) with tears in the larger piece, probable poor fixation Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1626 Artery - tibial PAXgene 1 2 pieces of 2 muscular arteries about 2mm in diameter; calcified deposits in intima; 10% adherent fat in one piece Acceptable View Image
GTEX-PLZ6 21-40 Male GTEX-PLZ6-1726 Nerve - tibial PAXgene 1 2 pieces, ~4 mm fat/connective tissue <10% of total specimen Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0126 Spleen PAXgene 1 2 pieces, 6x8mm; moderately congested Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0226 Coronary artery PAXgene 1 2 pieces, arteries 2x1mm make up about 15% of specimen with abundant pericardial fat and myocardium Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0326 Heart PAXgene 1 2 pieces, 7x5 & 7x8mm; includes papillary muscles Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0426 Aorta PAXgene 1 6 pieces, 10x1.3mm Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0526 Lung PAXgene 1 2 pieces, ~10x8 & 7x7mm; bronchopneumonia and alveolar desquamation Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0626 Esophagus - muscularis PAXgene 1 6 pieces, ~8x3mm; 5 of the 6 have major muscle fragmentation/tears; Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0726 Esophagus - mucosa PAXgene 0 4 pieces, ~4x4mm; mucosa=~0.3mm thick. Well preserved mucosa Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0826 Stomach PAXgene 1 6 pieces, ~8x2.5mm, mucosa 0.8mm, mild chronic gastritis, well-preserved fundic mucosa Acceptable View Image
GTEX-POMQ 21-40 Female GTEX-POMQ-0926 Urinary bladder PAXgene 2 6 pieces, ~5 x 7mm, mucosa partly sloughed Acceptable View Image