GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0226 |
Adrenal glands
|
PAXgene |
1
|
2, ~3x7mm adrenal cortex and medulla, well preserved. 3x0.6mm attached nerve in one
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0326 |
Aorta
|
PAXgene |
1
|
6 pieces. 10x1.3mm. no fatty deposits. Sparse adherent stroma
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0426 |
Lung
|
PAXgene |
1
|
2 ~10x7 & 8x7mm pieces. Patchy bronchopneumonia
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces,~5 mm sq with well preserved epithelium (0.25 mm thick)
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
5 pieces, ~9x4.5 mm. well-oriented specimens.
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0726 |
Pancreas
|
PAXgene |
0
|
2, ~ 10x8 mm pieces,<1% fat; focal fixation fractures
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0826 |
Stomach
|
PAXgene |
1
|
6 pieces, ~7x4.5mm. Very good mucosal (0.87mm) preservation in 2 pieces; none in others
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-0926 |
Colon, transverse
|
PAXgene |
1
|
4 pieces, 7x2mm. Good mucosal preservation. Tissue separation with tears
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1026 |
Urinary bladder
|
PAXgene |
1
|
6 ~10x4.8mm pieces. Well preserved epithelium in 3 pieces; none in other 3. Moderate submucosal edema. Moderate fixation artifacts.
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1126 |
Prostate
|
PAXgene |
1
|
2 ~10x10 & 9 x 6mm; focal atrophy
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1226 |
Testis
|
PAXgene |
1
|
2 pieces ~10mm sq; >60% atrophic, sclerotic tubules; remainder with minimal spermatogenesis. Capsule partially present.
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 10.5x8 & 11.5x7 mm. No fixation artifacts. Adherent vessel, 1 x 3 mm
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1426 |
Skin, leg
|
PAXgene |
1
|
6 ~10x3.7 mm (maximum) pieces. Fragmented dermis in 2 pieces (poor fixation)
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces ~9x8 & 6x7 mm pieces, large areas (>50%) with tears in the larger piece, probable poor fixation
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces of 2 muscular arteries about 2mm in diameter; calcified deposits in intima; 10% adherent fat in one piece
|
Acceptable
|
|
GTEX-PLZ6
|
21-40
|
Male
|
GTEX-PLZ6-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, ~4 mm fat/connective tissue <10% of total specimen
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 6x8mm; moderately congested
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, arteries 2x1mm make up about 15% of specimen with abundant pericardial fat and myocardium
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0326 |
Heart
|
PAXgene |
1
|
2 pieces, 7x5 & 7x8mm; includes papillary muscles
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, 10x1.3mm
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0526 |
Lung
|
PAXgene |
1
|
2 pieces, ~10x8 & 7x7mm; bronchopneumonia and alveolar desquamation
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~8x3mm; 5 of the 6 have major muscle fragmentation/tears;
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0726 |
Esophagus - mucosa
|
PAXgene |
0
|
4 pieces, ~4x4mm; mucosa=~0.3mm thick. Well preserved mucosa
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0826 |
Stomach
|
PAXgene |
1
|
6 pieces, ~8x2.5mm, mucosa 0.8mm, mild chronic gastritis, well-preserved fundic mucosa
|
Acceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-0926 |
Urinary bladder
|
PAXgene |
2
|
6 pieces, ~5 x 7mm, mucosa partly sloughed
|
Acceptable
|
|