GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis, good specimens
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa fairly well preserved, ~0.3-0.4mm, up to ~40% thickness
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, ~well preserved, lymphoid/Peyer aggregates are up to ~40% total tissue
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2126 |
Ovary
|
PAXgene |
1
|
2 pieces, atrophic for stated age of patient
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2226 |
Uterus
|
PAXgene |
1
|
2 pieces mainly myometrium, thin (~0.5mm) layer of inactive/basalis endometrial glands/stroma
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2326 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~150-200 microns
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2426 |
Nerve - tibial
|
PAXgene |
0
|
4 pieces, clean specimens, minimal fat
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2526 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~10-15% fascial/fibrous tissue, rep. delineated
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces clean specimens; focal Monckeberg medial sclerosis, encircled
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat, delineated
|
Acceptable
|
|
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-2826 |
Skin, leg
|
PAXgene |
0
|
6 pieces few foci adherent fat ~0.5-1mm, delineated
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; interstitial fibrosis
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibroadipose tissue and mammary ducts with periductal lymphocytic infiltrate and stromal fibrosis/hyalinization
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; keratosis
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0426 |
Heart
|
PAXgene |
1
|
2 pieces; one with extensive fibrosis and scarring suggesting old infarct and other with large vessels, nerves and surrounding fat up to 30%, myocyte hypertrophy
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0526 |
Aorta
|
PAXgene |
1
|
6 pieces; well trimmed and with atheromatous plaque formation
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; one with eccentric atheromatous plaque narrowing lumen and up to 1.025mm external fat; other with minimal amount of fat attached and atheromatous change with ~25% luminal narrowing
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0726 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, ~20% of internal fat, interstitial fibrosis and myocyte hypertrophy
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0826 |
Liver
|
PAXgene |
1
|
2 pieces; some congestion and steatosis
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-0926 |
Spleen
|
PAXgene |
1
|
2 pieces; marked congestion
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-1026 |
Pancreas
|
PAXgene |
2
|
2 pieces; periductal and interstitial fibrosis with parenchymal autolysis; rare islets of Langerhans (outlined)
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-1126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; cortex with focal interstitial fibrosis and chronic inflammation, sclerotic glomeruli and hyalinized vascular walls (diabetic nephropathy)
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-1226 |
Prostate
|
PAXgene |
2
|
2 pieces; one piece with 50% stromal hyperplasia devoid of glandular component; numerous corpora amylacea; sloughed glandular epithelium
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-1326 |
Omentum
|
PAXgene |
1
|
2 pieces; ~10% fibrovascular component
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
|