GTEX-15G1A
|
21-40
|
Male
|
GTEX-15G1A-1726 |
Ileum
|
PAXgene |
1
|
4 pieces, well preserved mucosa, ~5% lymphoid elements. Use for LCM studies
|
Acceptable
|
|
GTEX-15RIE
|
61-70
|
Male
|
GTEX-15RIE-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, colinic mucosa, only trace target lymphoid aggregates
|
Unacceptable
|
|
GTEX-15RIF
|
21-40
|
Male
|
GTEX-15RIF-1226 |
Ileum
|
PAXgene |
1
|
4 pieces, well fixed mucosa but too few lymphoid aggegates to justify analysis
|
Unacceptable
|
|
GTEX-15RJ7
|
41-50
|
Male
|
GTEX-15RJ7-1326 |
Ileum
|
PAXgene |
1
|
6 pieces; scattered lymphoid aggregates outlined, mucosa focally mildly autolyzed, one piece includes muscularis
|
Unacceptable
|
|
GTEX-15RJE
|
41-50
|
Male
|
GTEX-15RJE-1926 |
Ileum
|
PAXgene |
1
|
6 pieces; all contain abundant mucosal-submucosal target lymphoid tissue beneath sloughed epithelium, but all contain non-target full thickness muscularis propria; needs LCM for analysis
|
Unacceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1126 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections with largely autolyzed mucosa and only focal lymphoid tissue (target)
|
Unacceptable
|
|
GTEX-15SDE
|
51-60
|
Female
|
GTEX-15SDE-1126 |
Ileum
|
PAXgene |
1
|
6 pieces; colonic mucosa not ileum
|
Unacceptable
|
|
GTEX-15SHU
|
41-50
|
Female
|
GTEX-15SHU-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; total autolysis
|
Unacceptable
|
|
GTEX-15SHV
|
61-70
|
Male
|
GTEX-15SHV-1426 |
Ileum
|
PAXgene |
1
|
5 pieces; lymphoid tissue in 3 pieces [circled]; muscle (non-target) present on 2 pieces
|
Acceptable
|
|
GTEX-15SHW
|
61-70
|
Male
|
GTEX-15SHW-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; predominantly autolyzed mucosa with some muscularis, no significant/residual lymphoid tissue
|
Unacceptable
|
|
GTEX-15SKB
|
61-70
|
Male
|
GTEX-15SKB-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, ~20% residual lymphoid aggregates
|
Acceptable
|
|
GTEX-15SZO
|
51-60
|
Male
|
GTEX-15SZO-2826 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa autolyzed, ~30% residucal target lymphocytes
|
Acceptable
|
|
GTEX-15TU5
|
51-60
|
Male
|
GTEX-15TU5-2826 |
Ileum
|
PAXgene |
2
|
4 pieces; lymphoid-rich fragmented mucosa
|
Acceptable
|
|
GTEX-15UF6
|
61-70
|
Female
|
GTEX-15UF6-2826 |
Ileum
|
PAXgene |
3
|
4 pieces; lymphoid tissue autolyzed and dispersed; muscle content in 2 oieces
|
Unacceptable
|
|
GTEX-15UF7
|
41-50
|
Male
|
GTEX-15UF7-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; mild to moderate autolysis, colon, not ileum
|
Unacceptable
|
|
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; no significant lymphoid component
|
Unacceptable
|
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, fibroadipose tissue, not GTEx target
|
Unacceptable
|
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and abundant lymphoid component, several pieces include significant muscularis (not target)
|
Acceptable
|
|
GTEX-16AAH
|
51-60
|
Male
|
GTEX-16AAH-1426 |
Ileum
|
PAXgene |
1
|
6 pieces, lymphoid aggregates are ~10-20%
|
Acceptable
|
|
GTEX-16BQI
|
21-40
|
Female
|
GTEX-16BQI-1426 |
Ileum
|
PAXgene |
3
|
6 pieces; all with muscularis and no lymphoid content in autolyzed mucosa
|
Unacceptable
|
|
GTEX-16GPK
|
61-70
|
Male
|
GTEX-16GPK-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa and only focal lymphoid aggregate; small fragments of muscularis (not target)
|
Unacceptable
|
|
GTEX-16MT8
|
61-70
|
Female
|
GTEX-16MT8-2826 |
Ileum
|
PAXgene |
3
|
4 pieces, autolyzed mucosa, insufficient viable lymphoid aggregates to warrant analysis
|
Unacceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2526 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with target lymphoid tissue in 4 pieces (arrowed)
|
Acceptable
|
|
GTEX-16MTA
|
51-60
|
Male
|
GTEX-16MTA-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa and submucosa with good lymphoid tissue in 3 of 6
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; insufficient lymphoid tissue; all contain full thickness muscularis [not target]
|
Unacceptable
|
|