GTEX-15G1A
|
21-40
|
Male
|
GTEX-15G1A-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa remarkably well preserved, 0.4mm, ~10% thickness
|
Acceptable
|
|
GTEX-15RIE
|
61-70
|
Male
|
GTEX-15RIE-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa up to ~0.4mm
|
Acceptable
|
|
GTEX-15RIF
|
21-40
|
Male
|
GTEX-15RIF-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa ~0.3mm, ~5-10% thickness
|
Acceptable
|
|
GTEX-15RJ7
|
41-50
|
Male
|
GTEX-15RJ7-1526 |
Colon, transverse
|
PAXgene |
0
|
6 pieces; mostly well preserved mucosa and submucosa, 3 of 6 contain muscularis (outlined)
|
Acceptable
|
|
GTEX-15RJE
|
41-50
|
Male
|
GTEX-15RJE-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; lots of extruded mucus in 4 of 6 pieces [marked]
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, moderate autolysis, some attached fat
|
Acceptable
|
|
GTEX-15SDE
|
51-60
|
Female
|
GTEX-15SDE-1026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 1 has no muscularis (may represent sampling of 025 aliquot)
|
Acceptable
|
|
GTEX-15SHU
|
41-50
|
Female
|
GTEX-15SHU-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa totally necrotic; muscle intact
|
Acceptable
|
|
GTEX-15SHV
|
61-70
|
Male
|
GTEX-15SHV-1326 |
Colon, transverse
|
PAXgene |
1
|
4 pieces; 1 piece has no mucosa, 1 piece is mainly submucosa
|
Acceptable
|
|
GTEX-15SHW
|
61-70
|
Male
|
GTEX-15SHW-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, moderate to severe autolysis, serositis
|
Acceptable
|
|
GTEX-15SKB
|
61-70
|
Male
|
GTEX-15SKB-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa is totally autolyzed
|
Acceptable
|
|
GTEX-15SZO
|
51-60
|
Male
|
GTEX-15SZO-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa is ~0.3mm, advanced autolysis
|
Acceptable
|
|
GTEX-15TU5
|
51-60
|
Male
|
GTEX-15TU5-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa largely autpolyzed
|
Acceptable
|
|
GTEX-15UF6
|
61-70
|
Female
|
GTEX-15UF6-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, muscle intact
|
Acceptable
|
|
GTEX-15UF7
|
41-50
|
Male
|
GTEX-15UF7-1126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, small intestine
|
Unacceptable
|
|
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; edema, mucosal autolysis
|
Unacceptable
|
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, sections of small intestine, unknown location, not GTEx target
|
Unacceptable
|
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderately autolyzed mucosa and well preserved muscularis
|
Acceptable
|
|
GTEX-16AAH
|
51-60
|
Male
|
GTEX-16AAH-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, well preserved mucosa, ~10% of thickness
|
Acceptable
|
|
GTEX-16BQI
|
21-40
|
Female
|
GTEX-16BQI-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; 1 without muscularis propria
|
Acceptable
|
|
GTEX-16GPK
|
61-70
|
Male
|
GTEX-16GPK-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and muscularis
|
Acceptable
|
|
GTEX-16MT8
|
61-70
|
Female
|
GTEX-16MT8-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa largely sloughed, advanced autolysis
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; moderately to severely autolyzed mucosa and better preserved muscularis; congestion
|
Acceptable
|
|
GTEX-16MTA
|
51-60
|
Male
|
GTEX-16MTA-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections, well preserved
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-2126 |
Colon, transverse
|
PAXgene |
3
|
5 pieces; mucosa autolyzed; muscle intact
|
Acceptable
|
|