GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-1226 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; foci of chronic inflammation in lamina propria
|
Acceptable
|
 |
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-1326 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; foci of squamous epithelium and glandular carry-over [labeled] <5% area
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces; 15% and 10% external fat; interstitial fibrosis; moderately to severely autolyzed parenchyma; Langerhans islets present (rep outlined)
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-1926 |
Testis
|
PAXgene |
2
|
2 pieces; thickening of tubular basement membrane; lack of spermatogenesis; increase of Sertolli cells; congestion
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2026 |
Stomach
|
PAXgene |
2
|
6 pieces; moderate to severe mucosal autolysis and congestion; preserved muscularis
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2126 |
Prostate
|
PAXgene |
2
|
2 pieces; predominantly fibromuscular stroma; moderaltly to severely autolyzed glandular component and numerous corpora amylacea; urothelial epithelium (arrow)
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2226 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; target muscularis present; small fragments of squamous epithelium (outlined) and severely autolyzed glandular mucosa (arrows); ~2mm of serosa and fat
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderately autolyzed mucosa and preserved muscularis;
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and too few lymphoid aggregates (outlined) to warrant analysis(<5%)
|
Unacceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2726 |
Pituitary gland
|
PAXgene |
2
|
2 pieces; mostly adenohypophysis and arrowed neurohypophysis; disseminated calcifications
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2826 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; focal calcifications (arrow)
|
Acceptable
|
 |
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2926 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; Purkinje cells present; one piece with attached congested meninges (arrows)
|
Acceptable
|
 |
GTEX-1N2EE
|
61-70
|
Male
|
GTEX-1N2EE-0926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present; advanced tubular autolysis
|
Acceptable
|
 |
GTEX-1N2EE
|
61-70
|
Male
|
GTEX-1N2EE-1026 |
Prostate
|
PAXgene |
2
|
2 pieces, nodular glandular/stromal hyperplasia, glandular elements moderately autolyzed
|
Acceptable
|
 |
GTEX-1N2EE
|
61-70
|
Male
|
GTEX-1N2EE-1226 |
Spleen
|
PAXgene |
2
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1N2EE
|
61-70
|
Male
|
GTEX-1N2EE-1626 |
Lung
|
PAXgene |
2
|
2 pieces, congestion, edema, moderate/marked atalectasis
|
Acceptable
|
 |
GTEX-1N2EE
|
61-70
|
Male
|
GTEX-1N2EE-2626 |
Stomach
|
PAXgene |
2
|
6 pieces, target mucosa up to ~0.9 mm, 30-50% of thickness. Chronic gastritis; pattern suggests H pylori
|
Acceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-0726 |
Lung
|
PAXgene |
2
|
2 pieces; alveolar hemorrhage, macrophages and fibrosis
|
Unacceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1026 |
Liver
|
PAXgene |
2
|
2 pieces; severe central lobular vascular congestion and liver cell necrosis
|
Acceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1226 |
Prostate
|
PAXgene |
2
|
2 pieces; glands moderately autolyzed, stroma intact
|
Acceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1326 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; numerous hemorrhages in 60% area
|
Acceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in better shape than tubules; no sign of chronic disease
|
Acceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1526 |
Spleen
|
PAXgene |
2
|
2 pieces; moderately congested; capsule included in 1 piece [arrowed]
|
Acceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1626 |
Stomach
|
PAXgene |
2
|
4 pieces; no mucosa, muscularis only
|
Unacceptable
|
 |
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1826 |
Ileum
|
PAXgene |
2
|
5 pieces; mucosa autolyzed; dispersed lymphoid tissue; muscularis present in 4 pieces
|
Unacceptable
|
 |