GTEX-147JS
|
61-70
|
Male
|
GTEX-147JS-2326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present, tubules autolyzed
|
Acceptable
|
|
GTEX-147JS
|
61-70
|
Male
|
GTEX-147JS-2426 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa focally better preserved; gastropathic changes, up to ~2mm thick, 50-60% thickness
|
Acceptable
|
|
GTEX-147JS
|
61-70
|
Male
|
GTEX-147JS-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, glandular mucosa badly preserved, ~0.25mm thick
|
Acceptable
|
|
GTEX-147JS
|
61-70
|
Male
|
GTEX-147JS-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, target muscularis
|
Acceptable
|
|
GTEX-147JS
|
61-70
|
Male
|
GTEX-147JS-2726 |
Ileum
|
PAXgene |
3
|
4 pieces, glandular mucosa autolyzed; residual lymphoid aggregates are ~~20% of tissue
|
Acceptable
|
|
GTEX-147JS
|
61-70
|
Male
|
GTEX-147JS-2826 |
Prostate
|
PAXgene |
1
|
2 pieces, hyperplastic glandular pattern (rep encircled), focal chronic prostatitis
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed with minimal internal fat
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0226 |
Lung
|
PAXgene |
0
|
2 pieces; emphysematous change, several large vessels, bronchi and cartilage; focus of hemorrhage
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0326 |
Heart
|
PAXgene |
1
|
2 pieces; some interstitial fibrosis and myocyte hypertrophy
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0426 |
Omentum
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0526 |
Thyroid gland
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0626 |
Liver
|
PAXgene |
0
|
2 pieces; one piece includes capsule (target is 1cm below capsule), one includes larger vessel/duct (to be avoided)
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0726 |
Spleen
|
PAXgene |
1
|
2 pieces; includes capsule (target is 5mm below capsule), numerous hemosiderin-laden macrophages
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces; well preserved, islets well visualized, small portion internal fat
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-0926 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; includes medulla, cortex is largely sclerotic, numerous hemosiderin-laden cells
|
Unacceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; few fragments of muscularis (not target)
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1126 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1226 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1326 |
Stomach
|
PAXgene |
2
|
6 pieces; four are full thickness, two are mucosa/submucosa only
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1426 |
Mammary tissue (breast)
|
PAXgene |
1
|
3 pieces; some fibrocystic change
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1626 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed, <10% internal fat, epidermis measures 34 microns
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; large central defects (?poor fixation), portion of large vessel in 1 piece
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; includes partial rim of external fat (~20%)
|
Acceptable
|
|
GTEX-148VI
|
61-70
|
Female
|
GTEX-148VI-1926 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; includes adjacent vein and attached fat (1.3mm)
|
Acceptable
|
|