GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-1426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; tubules severely autolyzed; glomeruli somewhat less; scattered interstitial and glomerular scars
|
Acceptable
|
|
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-1526 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis present
|
Acceptable
|
|
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-2126 |
Adipose tissue
|
PAXgene |
2
|
2 pieces; 5% fibrous content
|
Acceptable
|
|
GTEX-1MCC2
|
21-40
|
Female
|
GTEX-1MCC2-1526 |
Ileum
|
PAXgene |
2
|
4 pieces; mildly to moderately autolyzed mucosa with three small lymphoid aggregates (outlined) representing less than 10% of tissue
|
Unacceptable
|
|
GTEX-1MCC2
|
21-40
|
Female
|
GTEX-1MCC2-1626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mildly to moderately autolyzed target mucosa and well preserved target muscularis
|
Acceptable
|
|
GTEX-1MCC2
|
21-40
|
Female
|
GTEX-1MCC2-1826 |
Skin, suprapubic
|
PAXgene |
2
|
6 pieces; 5% to 20% external and internal/periadnexal fat
|
Acceptable
|
|
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-0526 |
Liver
|
PAXgene |
2
|
2 pieces; no fibrosis, inflammation or fat
|
Acceptable
|
|
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-1526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; all pieces contain large amounts of medulla as well as cortex
|
Unacceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, surface mucosa moderately autolyzed, up to ~0.3mm
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1026 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; mucosa, not muscularis
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1126 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa and submucosa, superficial sloughing/autolysis
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0726 |
Prostate
|
PAXgene |
2
|
2 pieces; well preserved fibromuscular stroma and glandular component with mostly sloughed autolyzed epithelium
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-1926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately to severely autolyzed adrenal cortex; ~30% external fat (outlined)
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; moderate to severe autolysis of tubules with largely sloughed epithelium ; marked congestion; arteriolo-nephrosclerosis with hyalinized glomeruli (rep arrowed); interstitial nephritis
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-2226 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; fibroadipose tissue and nerves with gynecomastoid ductal and stromal hyperplasia; sloughed autolyzed ductal epithelium
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-2626 |
Stomach
|
PAXgene |
2
|
6 pieces; moderately to severely autolyzed gastric mucosa and marked congestion; well preserved muscularis
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-2926 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; 3 of 4 with congested meninges
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-3026 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces;2 of 4 with congested meninges (arrows); scattered Purkinje cells present
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-0126 |
Spleen
|
PAXgene |
2
|
2 pieces; mild congestion; small lymphoid follicles
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-0326 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; 0.7 mm focus of crystalline material. probably colloid
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-0526 |
Stomach
|
PAXgene |
2
|
6 pieces; microcystic glandular changes in mucosa with superficial autolysis/digestion
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-0726 |
Skin, suprapubic
|
PAXgene |
2
|
6 pieces; minimal dermal fat; focal untrimmed subcutaneous fat
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-0926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa with variable states of autolysis
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-1026 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; untrimmed mucosa comprises up to 10% of tissues
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-1126 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; largely fat; few ducts in fibrous component
|
Acceptable
|
|