GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0726 |
Atrial appendage
|
PAXgene |
0
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0926 |
Heart
|
PAXgene |
1
|
2 pieces cardiac muscle (heart), switched with -1025
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target gastroesophageal junction muscularis, switched with -0925
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, minimal atherosis. ~2.5mm nubbin of adherent fat, delineated
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1326 |
Omentum
|
PAXgene |
1
|
2 pieces 15% fascia/vascular elements, rep delineated
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces, ~50% adherent/insterstitial fat, delineated. Islets well preserved, rep encircled
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1526 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, no target lympohid aggregates, not worth GTEX analysis. Contaminant pancreatic tisue present, ensquared
|
Unacceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1626 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis appears reduced
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1726 |
Prostate
|
PAXgene |
1
|
2 pieces, all seminal vesicle, not GTEx target
|
Unacceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa up to ~0.25mm, moderately advanced autolysis
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.15mm, ~2-5% thickness
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, extnesive mucosa, not GTEx target
|
Unacceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-2126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-2226 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa well preserved, up to ~0.8mm, ~20-25% thickness
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-2326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, trace adherent fat, elineated; squamous epithelium is ~50-60 microns
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-2426 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-2526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements only
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-5001 |
Muscle, skeletal
|
Dry Ice |
|
1 piece, correleates with PFPE aliquot.
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-5004 |
Skin, leg
|
Dry Ice |
|
1 piece, correleates with PFPE aliquot.
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-5007 |
Heart
|
Dry Ice |
|
1 piece, correct target myocardium, does not correlate with incorrectly collected PFPE aliquot
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-5010 |
Esophagus - mucosa
|
Dry Ice |
|
1 piece, correleates with PFPE aliquot.
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-5013 |
Esophagus - muscularis
|
Dry Ice |
|
1 piece, correleates with PFPE aliquot.
|
Acceptable
|
|
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-5016 |
Prostate
|
Dry Ice |
|
1 piece, correleates with PFPE aliquot--seminal vesicle, not GTEx target
|
Unacceptable
|
|