GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; densely fibrotic stroma with few mammary ducts
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0926 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces; well dissected glands
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1026 |
Lung
|
PAXgene |
1
|
2 pieces; no exudates or fibrosis; bronchus in larger piece
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1126 |
Liver
|
PAXgene |
1
|
2 pieces; no infiltrates, fibrosis, congestion or fat
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; smaller piece has 30% fibrous content
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1326 |
Spleen
|
PAXgene |
2
|
2 pieces; no congestion; low lymphoid content
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1426 |
Pancreas
|
PAXgene |
2
|
2 pieces; chronic inflammation, fibrosis and atrophy; 60% fat content
|
Unacceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; well trimmed except for a 4mm fat nodule at end of 1 piece
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1626 |
Kidney - cortex
|
PAXgene |
2
|
4 pieces; tubules autolyzed, glomeruli intact; no sign of active or chronic disease
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
5 pieces; partly disrupted squamous epithelium
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
5 pieces; well dissected except 1 piece has 20% fibrous stroma
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 4 pieces have 10 to 30% fat content
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2026 |
Stomach
|
PAXgene |
1
|
4 pieces; no mucosa, only muscularis and fat
|
Unacceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2126 |
Ileum
|
PAXgene |
1
|
5 pieces; 4 pieces have mucosal lymphoid tissue, but muscularis present on all; LCM
|
Unacceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed on all; muscularis intact
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2326 |
Ovary
|
PAXgene |
1
|
2 pieces; ovum present
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; extraneous fibrous and fatty tissue in several pieces
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2526 |
Skin, suprapubic
|
PAXgene |
1
|
4 pieces; well trimmed; <2% dermal fat
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2626 |
Vagina
|
PAXgene |
2
|
6 pieces; epithelium largely sloughed
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2726 |
Uterus
|
PAXgene |
1
|
2 pieces; myometrium only, no endometrium [in these cuts]
|
Acceptable
|
|
GTEX-1S82U
|
21-40
|
Female
|
GTEX-1S82U-0126 |
Aorta
|
PAXgene |
1
|
6 pieces, trace atherosis, ~0.1mm
|
Acceptable
|
|
GTEX-1S82U
|
21-40
|
Female
|
GTEX-1S82U-0226 |
Stomach
|
PAXgene |
1
|
5 pieces, muscularis and serosa only, no target mucosa present
|
Unacceptable
|
|
GTEX-1S82U
|
21-40
|
Female
|
GTEX-1S82U-0326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target muscularis. Trace glandular elements/squamous mucosa, delineated
|
Acceptable
|
|
GTEX-1S82U
|
21-40
|
Female
|
GTEX-1S82U-0426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, sections of large elastic artery c/w aorta, not esophageal muscularis
|
Unacceptable
|
|
GTEX-1S82U
|
21-40
|
Female
|
GTEX-1S82U-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, fat and muscular artery, no esophageal mucosa or muscularis present
|
Unacceptable
|
|