GTEX-16MTA
|
51-60
|
Male
|
GTEX-16MTA-1926 |
Artery - tibial
|
PAXgene |
0
|
4 pieces; mild atherosclerosis
|
Acceptable
|
|
GTEX-16MTA
|
51-60
|
Male
|
GTEX-16MTA-2026 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; central defect in 1 piece, otherwise includes minimal fat/vessels
|
Acceptable
|
|
GTEX-16MTA
|
51-60
|
Male
|
GTEX-16MTA-2126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, central defects in both (?poor fixation)
|
Acceptable
|
|
GTEX-16MTA
|
51-60
|
Male
|
GTEX-16MTA-2226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; few pieces include residual attached fat, up to 15%, epidermis measures 49 microns
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0126 |
Pancreas
|
PAXgene |
1
|
2 pieces: 1 with 50% fat other with 5%; scattered focal exocrine atrophy and fibrosis; 2 ducts with PANin 1A changes
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0226 |
Spleen
|
PAXgene |
1
|
2 pieces; mild congestion
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0326 |
Aorta
|
PAXgene |
1
|
6 pieces; mild flat sclerotic plaques up to 0.5mm thick
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0426 |
Heart
|
PAXgene |
1
|
2 pieces; contraction bands
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0526 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1 piece has 10% fibrous content on edge and no fat; other has 50% fat
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; poorly trimmed: both pieces have at least 50% extraneous fat and myocardium
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; scattered focal lymphocytic deposits, possible early Hashimoto thyroiditis
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0826 |
Lung
|
PAXgene |
1
|
2 pieces; atelectatic; moderate anthracotic deposits; pigmented macrophages
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; all contain esophageal squamous mucosa, not muscularis propria [target]
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; submucosal glands and ducts are prominent making up 10%
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1126 |
Omentum
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces;
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces: one contains mucosa [not target] labeled, as well as muscularis; others are well dissected muscularis propria (target)
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; insufficient lymphoid tissue; all contain full thickness muscularis [not target]
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; <5% dermal fat
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1626 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; well dissected; mild to moderate diffuse lymphocytic infiltrate; 1 piece has 20% internal fat content
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1726 |
Prostate
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; no mucosa, only muscularis propria and submucosa
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibroadipose tissue without ducts
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-2026 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis
|
Acceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-2126 |
Colon, transverse
|
PAXgene |
3
|
5 pieces; mucosa autolyzed; muscle intact
|
Acceptable
|
|