GTEX-1S3DN
|
41-50
|
Male
|
GTEX-1S3DN-2226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epitheliumis ~30-40 microns
|
Acceptable
|
|
GTEX-1S3DN
|
41-50
|
Male
|
GTEX-1S3DN-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fascia (rep delineated)/dystrophic calcification(ensquared), focal chronic lymphoid aggregate (encircled)
|
Acceptable
|
|
GTEX-1S3DN
|
41-50
|
Male
|
GTEX-1S3DN-2426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces(fragmented)-atrophy, ~20% interstitial fat/fibrous tissue
|
Acceptable
|
|
GTEX-1S3DN
|
41-50
|
Male
|
GTEX-1S3DN-2526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fat
|
Acceptable
|
|
GTEX-1S3DN
|
41-50
|
Male
|
GTEX-1S3DN-2626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no significant atherosis; trace adherent fibrous tissue
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; ~10% mostly periadnexal fat; ~37 microns thick epidermis
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue with 10% and 30% fibrovascular component; adnexa and hair bulb present (outlined); deep subcutaneous fat likely
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; nerve fascicles, prineurium and epineurium with attached rim of adipose tissue
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; lumina open; 0.5mm attached adventitia
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0526 |
Lung
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis; marked congestion, collapsed alveoli with aggregates of "heart failure cells" (rep outlined); thick walled vessels; anthracosis
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0626 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces;~15% glandular/ductal elements and 60% squamous epithelium and 25% submucosa
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis; a few small aggregates of lymphocytes (outlined); central area of empty spaces and blood vessels (arrows)
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; 0.35mm thick stratified squamous epithelium; subtle surface desquamation; submucosal glands (outlined)
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis and two small fragments of squamous epithelium (outlined)
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1126 |
Stomach
|
PAXgene |
2
|
6 pieces; moderate to severe gastric mucosa autolysis; two pieces with trace of muscularis (outlined)
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated fragmented mature adipose tissue
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair bearing skin and external fat up to 30% (outlined)
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces; preserved parenchyma with Langerhans islets (rep outlined); moderate autolysis of septal fat
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1526 |
Ileum
|
PAXgene |
2
|
4 pieces; moderate to severe mucosal autolysis; residual target lymphoid aggregates are ~10% of tissue; non-target muscularis present
|
Unacceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mild to moderate mucosal autolysis; muscularis preserved
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mature adipose tissue and 40% and 10% fibrovascular component; ductal structures not present
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1926 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-2026 |
Prostate
|
PAXgene |
1
|
2 pieces; mostly fibromuscular stroma and nerves; surface urethral epithelium (arrows)
|
Unacceptable
|
|