|
GTEX-Q2AH
|
21-40
|
Male
|
GTEX-Q2AH-1826 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces , 10x6 & 9x6mm; large tissue tears in one piece
|
Acceptable
|
 |
|
GTEX-Q2AH
|
21-40
|
Male
|
GTEX-Q2AH-1926 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~5x2.6mm; minor fat tissue
|
Acceptable
|
 |
|
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0826 |
Stomach
|
PAXgene |
1
|
6 pieces up to 8x4.5 mm; good mucosa; many mucosal tissue tears in every piece, doesn’t appear to be poor fixation
|
Acceptable
|
 |
|
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1326 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x3 mm; moderate tissue tears
|
Acceptable
|
 |
|
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 10x8 & 13x10 with large central hollow fixation defects
|
Acceptable
|
 |
|
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-1326 |
Fallopian tube
|
PAXgene |
0
|
2 pieces fibro-vascular tissue, not tube
|
Unacceptable
|
 |
|
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-1726 |
Cervix - endocervix
|
PAXgene |
1
|
2 ~10.5x2.2mm aliquots, each ~40 glandular tissue. One aliquot is more upper endo-cervix/lower uterine segment
|
Acceptable
|
 |
|
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-1826 |
Adipose tissue
|
PAXgene |
1
|
2 ~8.5x6mm aliquots. Areas of under/poor fixation centrally
|
Acceptable
|
 |
|
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-2126 |
Nerve - tibial
|
PAXgene |
1
|
4 ~4.5x3mm pieces of tendon. Incorrect tissue, not in GTEx list
|
Unacceptable
|
 |
|
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-2226 |
Artery - tibial
|
PAXgene |
1
|
2 ~4x2mm aliquots. ~50% of aliquots are peri-arterial connective tissue, fat, small vessels
|
Acceptable
|
 |
|
GTEX-QCQG
|
51-60
|
Female
|
GTEX-QCQG-1826 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, ~10x10 mm; large central defects, probably fixation artifacts
|
Acceptable
|
 |
|
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-0226 |
Adipose tissue
|
PAXgene |
1
|
2 ~8x7mm aliquots, focal areas centrally are under-fixed
|
Acceptable
|
 |
|
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-0626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~10x8mm pieces, both with atrophic TDLUs, one with more adipose tissue; the other with more stroma
|
Acceptable
|
 |
|
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-0726 |
Coronary artery
|
PAXgene |
1
|
2 aliquots ~3 x 1.5mm. Only one has a ~0.66mm coronary artery section; the rest is adipose tissue; artery is less than 10% of total tissue area
|
Unacceptable
|
 |
|
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-1526 |
Spleen
|
PAXgene |
2
|
2 ~7.5x6.5mm aliquots, foci of adherent extraspenic vascular/fibrous tissue present (~4x1mm)
|
Acceptable
|
 |
|
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-2826 |
Urinary bladder
|
PAXgene |
2
|
6 ~8x5mm pieces. Urotherlium nearly completely sloughed; muscularis/adipose tissue is >99% of sections
|
Acceptable
|
 |
|
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, up to 10.7x5 with ducts; ~70% adipose
|
Acceptable
|
 |
|
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-1526 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 8.6x4.7 mm; mucosa and muscle on each, moderately focally sloughed; focal tissue fracture (histology origin)
|
Acceptable
|
 |
|
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-1826 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 10x6 & 7x6 mm; well fixed; no hollow core
|
Acceptable
|
 |
|
GTEX-QDVJ
|
51-60
|
Male
|
GTEX-QDVJ-1926 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; 9x6 & 8x7mm; severe tissue fracture in one piece (histology origin)
|
Acceptable
|
 |
|
GTEX-QDVN
|
51-60
|
Male
|
GTEX-QDVN-2126 |
Adipose tissue
|
PAXgene |
1
|
2 ~9x6mm aliquots, one with ~40% fibrous (?scar) tissue
|
Acceptable
|
 |
|
GTEX-QDVN
|
51-60
|
Male
|
GTEX-QDVN-2426 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~9x6mm aliquots, ~40% interstitial adipose tissue
|
Acceptable
|
 |
|
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0326 |
Adipose tissue
|
PAXgene |
1
|
2 ~8.5x8mm aliquots
|
Acceptable
|
 |
|
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~10x6mm aliquots; ~5% interstitial adipose tissue in one
|
Acceptable
|
 |
|
GTEX-QEG4
|
21-40
|
Male
|
GTEX-QEG4-0926 |
Aorta
|
PAXgene |
1
|
6 ~8.5x1.5mm pieces, several with adherent fat/fibrous tissue up to ~5.2mm
|
Acceptable
|
 |