GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2126 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; well dissected muscularis, but not well preserved
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2326 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; well dissected muscularis, but not well preserved
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2426 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; mammary ducts, moderately autolyzed, in fibroadipose tissue in 1 piece; no ducts in other piece
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2626 |
Prostate
|
PAXgene |
2
|
2 pieces; glandular epithelium severely autolyzed, stroma intact
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2726 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; 3 have all muscularis (1 with 0.3mm squamous carry-over-labeled), 2 have 30% muscle, remainder fat and stroma; 1 has no muscle, all stroma
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2826 |
Testis
|
PAXgene |
2
|
2 pieces; active spermatogenesis
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-3126 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
 |
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-0826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, cortex; moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-1026 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponification, Islets largely degenerated. one encircled
|
Acceptable
|
 |
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-2226 |
Testis
|
PAXgene |
2
|
2 pieces; moderately advanced autolysis; spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-0626 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
 |
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces, mildl-moderate saponification; islets still visible, rep encircled, but with early degenerative changes
|
Acceptable
|
 |
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-1926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, pancreas, no adrenal present
|
Unacceptable
|
 |
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-2026 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, partial sloughing of squamous mucosa, residual up to ~0.25mm
|
Acceptable
|
 |
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-2226 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, autolyzing gastric mucosa; no muscularis present
|
Unacceptable
|
 |
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-2726 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates ~20% total tissue, rep delineated
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-0426 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; 5% fat at edge of 1 piece
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-0526 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; up to 20% external fibrofatty content
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-0726 |
Liver
|
PAXgene |
2
|
2 pieces; moderate centrilobular congestion with mild centrilobular macrovesicular steatosis
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1026 |
Spleen
|
PAXgene |
2
|
2 pieces; moderate to severe red pulp vascular congestion
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1226 |
Prostate
|
PAXgene |
2
|
2 pieces, 1 with well preserved acini and periurethral ducts; the other has severely autolyzed glands and intact stroma
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosal autolysis varies from moderate to severe, muscularis from slight to moderate
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1526 |
Adrenal glands
|
PAXgene |
2
|
2 pieces: 1 with 80% fat
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces: 5 are cortex, 1 is medulla [labeled]; no sign of active or chronic lesions; glomeruli well preserved, tubules moderately to severely autolyzed
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1726 |
Gastroesophageal junction
|
PAXgene |
2
|
6 muscular pieces, 5 large, 1 small, plus 3 small nonmuscular fragments
|
Acceptable
|
 |