GTEX-14PKV
|
21-40
|
Female
|
GTEX-14PKV-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, target lymphoid aggregates are ~60% of tissue, excellent specimen
|
Acceptable
|
|
GTEX-14PN3
|
61-70
|
Female
|
GTEX-14PN3-2026 |
Ileum
|
PAXgene |
1
|
5 pieces, 4 with plentiful lymphoid tissue [outlined]; well dissected without muscle
|
Acceptable
|
|
GTEX-14PN4
|
51-60
|
Male
|
GTEX-14PN4-2726 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with no significant residual lymphoid component, muscularis present (not target)
|
Unacceptable
|
|
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; fragments of autolyzed mucosa (no lymphoid nodules) and muscularis
|
Unacceptable
|
|
GTEX-14XAO
|
61-70
|
Female
|
GTEX-14XAO-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, well-preserved, ~40% target lymphoid aggregates
|
Acceptable
|
|
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1726 |
Ileum
|
PAXgene |
1
|
6 pieces; only 1 has lymphoid tissue and it is a tiny, 1mm, focus; also is full thickness bowel wall (not target)
|
Unacceptable
|
|
GTEX-15CHQ
|
61-70
|
Male
|
GTEX-15CHQ-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; 1 very small lymphoid nodule [outlined]; mucosa autolyzed
|
Unacceptable
|
|
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; predominantly muscularis (not target) with autolyzed mucosa and only focal lymphoid elements
|
Unacceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-2026 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa autolyzed but residual target lymphoid aggregates are ~20% of tissue
|
Acceptable
|
|
GTEX-15D1Q
|
41-50
|
Male
|
GTEX-15D1Q-2426 |
Ileum
|
PAXgene |
3
|
3 pieces, mucosa autolyzed, residual target lymphoid aggregates are ~20% of tissue
|
Acceptable
|
|
GTEX-15D79
|
51-60
|
Male
|
GTEX-15D79-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; abundant but autolyzed lymphoid tissue
|
Unacceptable
|
|
GTEX-15DCD
|
61-70
|
Female
|
GTEX-15DCD-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa with some residual lymphoid aggregates ~30% of tissue
|
Unacceptable
|
|
GTEX-15DCE
|
21-40
|
Male
|
GTEX-15DCE-1926 |
Ileum
|
PAXgene |
2
|
6 pieces: small lymphoid nodules in 5/6 pieces [labeled] LCM; all pieces have abundant muscularis propria
|
Unacceptable
|
|
GTEX-15DCZ
|
21-40
|
Female
|
GTEX-15DCZ-2926 |
Ileum
|
PAXgene |
3
|
4 pieces, target lymphoid aggregates are ~30% total
|
Acceptable
|
|
GTEX-15DDE
|
51-60
|
Female
|
GTEX-15DDE-2626 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa markedly autolyzed, residual target lymphoid elements, rep delineated, ~20-30% total
|
Acceptable
|
|
GTEX-15DYW
|
61-70
|
Female
|
GTEX-15DYW-2526 |
Ileum
|
PAXgene |
3
|
4 fragmented pieces; little lymphoid tissue present; possible LCM
|
Unacceptable
|
|
GTEX-15DZA
|
21-40
|
Female
|
GTEX-15DZA-0826 |
Ileum
|
PAXgene |
3
|
6 pieces, ~target lymphoid aggregates are ~5-10% tissue, best sampled by LCM
|
Acceptable
|
|
GTEX-15EO6
|
51-60
|
Male
|
GTEX-15EO6-2226 |
Ileum
|
PAXgene |
3
|
4 pieces, totally autolyzed, correct target but too few lymphoid aggregates to warrant analysis (~5%)
|
Unacceptable
|
|
GTEX-15EOM
|
21-40
|
Female
|
GTEX-15EOM-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections, no significant lymphoid tissue
|
Unacceptable
|
|
GTEX-15ER7
|
21-40
|
Female
|
GTEX-15ER7-2626 |
Ileum
|
PAXgene |
1
|
6 pieces; partially autolyzed mucosal fragments with prominent lymphoid component and rare portion of muscularis
|
Acceptable
|
|
GTEX-15ETS
|
41-50
|
Female
|
GTEX-15ETS-2126 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates are ~20% tissue, rep foci delineated
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-1826 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates are ~5-10%, delineated
|
Acceptable
|
|
GTEX-15F5U
|
41-50
|
Male
|
GTEX-15F5U-1326 |
Ileum
|
PAXgene |
1
|
4 pieces; samples contain several small lymphoid follicles [circled] but too much full thickness ileal muscularis. LCM
|
Unacceptable
|
|
GTEX-15FZZ
|
21-40
|
Female
|
GTEX-15FZZ-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; full thickness of wall (not target) and minimal lymphoid tissue [circled] LCM
|
Unacceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; totally autolyzed mucosa and no evidence of target lymphoid aggregates, fragments of muscularis (not target)
|
Unacceptable
|
|