GTEX-13OVK
|
21-40
|
Male
|
GTEX-13OVK-0526 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; full thickness (autolyzed) glandular mucosa and muscular wall; not gastroesophageal target tissue (may be duodenum)
|
Unacceptable
|
|
GTEX-13OVL
|
41-50
|
Male
|
GTEX-13OVL-1626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; no thyroid, only skeletal muscle
|
Unacceptable
|
|
GTEX-13OVL
|
41-50
|
Male
|
GTEX-13OVL-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all are full thickness with mucosa
|
Unacceptable
|
|
GTEX-13OW6
|
51-60
|
Male
|
GTEX-13OW6-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; squamous mucosa is partially sloughed, congestion and chronic inflammation, all pieces include muscularis propria (not target)
|
Unacceptable
|
|
GTEX-13OW6
|
51-60
|
Male
|
GTEX-13OW6-2326 |
Ileum
|
PAXgene |
2
|
2 pieces; moderate to severe autolysis of mucosa, no lymphoid nodules, muscularis also present (not target)
|
Unacceptable
|
|
GTEX-13OW8
|
61-70
|
Male
|
GTEX-13OW8-1126 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis
|
Unacceptable
|
|
GTEX-13OW8
|
61-70
|
Male
|
GTEX-13OW8-3126 |
Ileum
|
PAXgene |
2
|
6 pieces; severely autolyzed mucosa, but residual lymphoid component, muscularis also present (not target)
|
Unacceptable
|
|
GTEX-13PDP
|
61-70
|
Male
|
GTEX-13PDP-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; fragments of autolyzed mucosa and muscularis (not target) with no significant residual lymphoid tissue (target)
|
Unacceptable
|
|
GTEX-13PLJ
|
51-60
|
Female
|
GTEX-13PLJ-1426 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; too much extraneous tissue, e.g., lip skin, nerves, fibrofatty stroma; [could be used for LCM]
|
Unacceptable
|
|
GTEX-13PVQ
|
51-60
|
Male
|
GTEX-13PVQ-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; 1 piece is vein, other contains fibrofatty tissue, heart muscle and small vessels
|
Unacceptable
|
|
GTEX-13PVQ
|
51-60
|
Male
|
GTEX-13PVQ-2826 |
Ileum
|
PAXgene |
2
|
4 pieces; several lymphoid collections [outlined] suitable for LCM, but too diluted by autolyzed non-lymphoid tissue for GTEx
|
Unacceptable
|
|
GTEX-13QIC
|
61-70
|
Female
|
GTEX-13QIC-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with residual lymphoid nodules (some outlined)
|
Unacceptable
|
|
GTEX-13QJC
|
61-70
|
Female
|
GTEX-13QJC-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; limited number of lymphoid nodules (outlined) diluted by extraneous tissue; better suited for LCM
|
Unacceptable
|
|
GTEX-13RTK
|
21-40
|
Male
|
GTEX-13RTK-1026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, modeate -advanced autolysis, viable portions are small bowel
|
Unacceptable
|
|
GTEX-13S7M
|
61-70
|
Female
|
GTEX-13S7M-1326 |
Ileum
|
PAXgene |
2
|
4 pieces; too little lymphoid tissue; barely useful for LCM
|
Unacceptable
|
|
GTEX-13SLX
|
51-60
|
Female
|
GTEX-13SLX-2926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; muscularis, 3 pieces include autolyzed mucosa (not target)
|
Unacceptable
|
|
GTEX-13VXU
|
51-60
|
Male
|
GTEX-13VXU-1726 |
Ileum
|
PAXgene |
3
|
6 pieces; small amount of partly autolyzed lymphoid tissue. LCM
|
Unacceptable
|
|
GTEX-13VXU
|
51-60
|
Male
|
GTEX-13VXU-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; totally autolyzed mucosa; no muscularis propria
|
Unacceptable
|
|
GTEX-13W3W
|
61-70
|
Female
|
GTEX-13W3W-0826 |
Thyroid gland
|
PAXgene |
0
|
2 pieces, skeletal (?strap) muscle
|
Unacceptable
|
|
GTEX-13W3W
|
61-70
|
Female
|
GTEX-13W3W-0926 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, mainly medulla; a few foci of glomeruli present (delineated)
|
Unacceptable
|
|
GTEX-13W3W
|
61-70
|
Female
|
GTEX-13W3W-1926 |
Stomach
|
PAXgene |
1
|
6 pieces, muscularis,no mucosa
|
Unacceptable
|
|
GTEX-13W46
|
51-60
|
Male
|
GTEX-13W46-2526 |
Ileum
|
PAXgene |
2
|
4 pieces (fragmented); autolyzed with minimal lymphoid tissue
|
Unacceptable
|
|
GTEX-13X6H
|
51-60
|
Female
|
GTEX-13X6H-0226 |
Coronary artery
|
PAXgene |
1
|
6 pieces; aorta NOT coronary artery
|
Unacceptable
|
|
GTEX-13X6H
|
51-60
|
Female
|
GTEX-13X6H-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1 piece 80% fat, other 70% fat; LCM possible
|
Unacceptable
|
|
GTEX-13X6H
|
51-60
|
Female
|
GTEX-13X6H-2026 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; full thickness rather than muscularis only. Potentially LCM
|
Unacceptable
|
|