GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0526 |
Atrial appendage
|
PAXgene |
1
|
1 piece, unremarkalble
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0626 |
Spleen
|
PAXgene |
1
|
1 piece, moderate congestion
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0726 |
Pancreas
|
PAXgene |
1
|
1 piece, well preserved, Islets well seen (rep delineated), small amounts adherent fat, highlighted; patchy fibrosis suggests remote pancreatitis.
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0826 |
Omentum
|
PAXgene |
1
|
1 piece, minute additional fragment. No significant fibrosis/vessels
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0926 |
Skin, suprapubic
|
PAXgene |
0
|
3 pieces, minimal fat, squamous epithelium is ~60microns thick
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1026 |
Adrenal glands
|
PAXgene |
1
|
1 piece (fragmented), prominent medulla is ~50% of specimen (rep area delineated), rest cortex,
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
3 pieces, all muscularis, trace adherent serosa, good specimens
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
3 pieces, essentially all gastric cardia, minute focus squamous mucosa delineated. Not part of GTEx
|
Unacceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
3 pieces, all muscularis
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1426 |
Ileum
|
PAXgene |
1
|
3 pieces, excellent specimen; well preserved with Peyer patches ~50% of specimen, rep areas delineated
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1526 |
Colon, transverse
|
PAXgene |
1
|
3 pieces; mucosa beautifully preserved, ~10-15% thickness, excellent specimen
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1626 |
Stomach
|
PAXgene |
1
|
3 pieces, excellent specimen, well preserved mucosa is ~50% thickness, ave 1mm
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1726 |
Colon, sigmoid
|
PAXgene |
1
|
3 pieces, all muscularis, good specimens
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
1 piece, trace ductal elements (rep. delineated) glandular and stromal gynecomastoid hyperplasia
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1926 |
Prostate
|
PAXgene |
1
|
1 piece. Diffuse high grade adenocarcinoma (Gleason sum score 5+4=9). Cannot be used for GTEx
|
Unacceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-2026 |
Testis
|
PAXgene |
1
|
1 piece, spermatogenesis is present. Unusally prominent Leydig cell aggregates; rep ones delineated.
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-2126 |
Adipose tissue
|
PAXgene |
0
|
1 piece, unremarkable
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-2226 |
Skin, leg
|
PAXgene |
0
|
3 pieces squamous epithelium is ~100microns
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-2326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, discontinuous rim of adherent fat on both, up to ~2.5mm, delineated
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-2426 |
Muscle, skeletal
|
PAXgene |
0
|
1 piece ~10% interstitial fat, rep. foci delineated
|
Acceptable
|
 |
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-2526 |
Artery - tibial
|
PAXgene |
0
|
1 piece, ~30% atherosis, nubbin of adherent fibrous tissue, ~0.5mm, delineated
|
Acceptable
|
 |
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, well trimmed, squamous epithelium is 30-65 microns thick
|
Acceptable
|
 |
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, focal vascular calicification
|
Acceptable
|
 |
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, both with partial rim of adipose tissue (~20-40% total)
|
Acceptable
|
 |
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, one piece is rim of vessel with fragments of calcified material, second is incomplete section due to severe calcific sclerosis with narrowing of the lumen
|
Acceptable
|
 |