GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-1926 |
Pancreas
|
PAXgene |
2
|
2 pieces; moderate to severe autolysis of parenchyma and associated septal fat; 50% and 20% external fat; rare Langerhans islets (rep outlined)
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis with rim of serosa
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2226 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; only remnants of autolyzed mucosa (arrows) and preserved muscularis mucosa
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; severely autolyzed gastric mucosa and preserved muscularis
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; gynecomastoid ductal and stromal hyperplasia; ~50% adipose tissue
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces;15% and 5% fat mostly perivascular (outlined); couple of empty spaces (arrows)
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderate to severe mucosal autolysis; preserved muscularis; congested serosa
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2726 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and <5% residual lymphoid aggregates
|
Unacceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2826 |
Colon, sigmoid
|
PAXgene |
3
|
4 pieces; autolyzed small focal rims of mucosa; moderate to severe autolysis of target muscularis
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2926 |
Brain - cortex
|
PAXgene |
1
|
4 fragmented pieces; tiny remnants of meninges with calcifications (outlined)
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces; Purkinje cells present; tiny remnants of meninges (arrows)
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece: 70% adenohypophysis and 30% neurohypophysis
|
Acceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion; small fragment of capsule (arrow); larger vessel included (outlined)
|
Acceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; 1.5mm of attached adventitia
|
Acceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0326 |
Heart
|
PAXgene |
1
|
2 pieces; fatty streaks along the vessels (outlined); one piece with ~25% external fat (arrow)
|
Acceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0426 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 5-10% internal (interstitial, perivascular and subepicardial) fat (arrows)
|
Acceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; myocardium; 40% and 50% external fat attached; coronary artery not identified
|
Unacceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; target mucosa not present; well trimmed muscularis
|
Unacceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; non target stratified squamous epithelium with lamina propria (outlined) and target muscularis
|
Unacceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; non target gastric and esophageal mucosa with lamina propria; insufficient representation of target muscularis (outlined)
|
Unacceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-0926 |
Stomach
|
PAXgene |
2
|
6 pieces; mainly muscularis and tiny fragments of gastric mucosa (outlined)
|
Unacceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-1026 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue and fibrovascular component
|
Acceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-1126 |
Pancreas
|
PAXgene |
2
|
2 pieces; rare Langerhans islets (outlined)
|
Acceptable
|
|
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-1226 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately to severely autolyzed mucosa and 3 of 6 pieces contain preserved lymphoid aggregates (outlined)
|
Acceptable
|
|