GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-1726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-1826 |
Stomach
|
PAXgene |
1
|
6 pieces, target mucosa well-fixed, good specimen, up to ~1mm, 50-60% thickness
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates are ~10% tissue, borderline, rep delineated
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-2026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa well- fixed, up to ~0.5mm, ~10-80% thickness
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, adherent fatty nubbins up to ~3mm
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-2226 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fat
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-2326 |
Artery - tibial
|
PAXgene |
0
|
2 pieces rim of adherent fat/fibrous tissue up to ~0.8mm, ~40% total tissue; sample with care
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-2426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, myo-atrophy; interstitial fat/fibrous tissue up to ~40%, rep delineated.
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, trace fascia/vascular elements
|
Acceptable
|
|
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-2626 |
Skin, leg
|
PAXgene |
0
|
6 pieces, adherent dermal fat up to ~2mm, delineated; squamous epithelium is ~20-30 microns
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, nodular goitre; regressive changes
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, adherent serosa/fat up to ~1mm
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0426 |
Lung
|
PAXgene |
1
|
2 pieces, trace congestion
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0526 |
Liver
|
PAXgene |
1
|
2 pieces, macrovesicular steatosis, moderate, ~30-40% of parenchyma
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces, islets fairly well preserved, rep encircled. ~30% fat, rep delineated
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0726 |
Omentum
|
PAXgene |
1
|
2 pieces, trace fascia
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0826 |
Stomach
|
PAXgene |
1
|
6 pieces, target mucosa up to ~1mm, ~25-30% thickness. Luminal surface more autolyzed
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~10-20% thickness. Few submucosal mucus glands present, rep encircled
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
5 pieces, confirmed target muscularis; ~10% "contaminant" mucosa, rep delineated
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1226 |
Prostate
|
PAXgene |
1
|
2 pieces. Not target prostate; seminal vesicle
|
Unacceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1326 |
Testis
|
PAXgene |
1
|
2 pieces. Not testis. Stromal tissue of unknown provenance.
|
Unacceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis. ~15-20% 'contaminant' mucosa present, rep delineated
|
Acceptable
|
|