GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1126 |
Lung
|
PAXgene |
1
|
2 pieces, mild edema, evidence of chronic congestion, hemosiderin-laden macrophages moderately abundant
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1226 |
Pancreas
|
PAXgene |
1
|
2 pieces, islets well-preserved, rep encircled; small edge of adherent fat, 1.5-2mm, delineated
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1326 |
Stomach
|
PAXgene |
1
|
6 pieces, moderate chronic gastritis; mucosa up to ~1mm, ~25% thickness
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, no significant dermal fat; squamous mucosa is 30-35 microns
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.35mm, 10-20% of thickness
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1826 |
Ileum
|
PAXgene |
2
|
5 pieces, < 1% target lymphoid aggregates present
|
Unacceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa is ~0.35mm, 10-15% of thickness
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-2126 |
Testis
|
PAXgene |
1
|
2 pieces, markedly reduced spermatogenesis
|
Acceptable
|
|
GTEX-1QL29
|
41-50
|
Male
|
GTEX-1QL29-2226 |
Prostate
|
PAXgene |
1
|
2 pieces, acute prostatitis
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces, islets well-preserved, though rare, rep encircled. Focal Pan IN 1, ensquared (PRC consensus)
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosis up to ~2mm
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0526 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibrous mastopathy
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0626 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, adherent dermal fat up to ~2mm; squamous epithelium is ~40-50 microns
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~20% thickness; submucosal mucus glands numerous, rep encircled
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent rims of serosa up to ~1mm
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, <50% target muscularis: stroma, squamous mucosa, mucus gland are >50% of specimen
|
Unacceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-1026 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa up to ~1mm, 30-80% thickness. Microglandular microcystic changes noted, rep ensquared (PRC consensus)
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-1126 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5-10% mesothelial/fascia hyerplasia, interstitial
|
Acceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-1226 |
Ileum
|
PAXgene |
1
|
6 pieces, colon, not terminal ileum
|
Unacceptable
|
|
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, fragmented, target mucosa (rep encircled) well-fixed, up to ~0.5mm
|
Acceptable
|
|