GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.3mm, ~10-20% thickness; prominent submucosal mucus glands, rep delineated
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-1726 |
Omentum
|
PAXgene |
1
|
2 pieces., minimal fascia/ vasular elements
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-1826 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates are ~5-10%, delineated
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.5mm but glandular elements with near-total autolysis
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~20% "contaminant" mucosa
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2126 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular elements with moderate-advanced autolysis
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2226 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~50 microns
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2326 |
Testis
|
PAXgene |
1
|
2 pieces (fragmented); spermatogenesis is present
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
1 piece,mainly fibroadipose elements; mild gyynecomastoid hyerplasia; ducta elements delineated (rep)
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2526 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa completely autolyzed/sloughed
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2626 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces glandular elements (delineated) are ~60-70% of tissue, rest is stroma/squamous mucosa
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0126 |
Spleen
|
PAXgene |
0
|
2 pieces; congested, 1 piece includes capsule (target is 5mm below capsule)
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces; small portion of attached fat on 1 piece, focal PanIN-1, some atrophy
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0326 |
Omentum
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0426 |
Lung
|
PAXgene |
1
|
2 pieces; extensive hemorrhage/clot
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair-bearing skin, several include significant attached fat, up to 50%
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0626 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; 70% fat/30% dense fibrocollagenous stroma with benign ducts and lobules
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; includes small portion of muscularis propria
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1026 |
Stomach
|
PAXgene |
1
|
6 pieces; predominantly muscularis with few pieces including mucosa (not gastric body)
|
Unacceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1126 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections with largely autolyzed mucosa and only focal lymphoid tissue (target)
|
Unacceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, moderate autolysis, some attached fat
|
Acceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis (target) and mucosa (not target)
|
Unacceptable
|
|
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1426 |
Vagina
|
PAXgene |
0
|
6 pieces
|
Acceptable
|
|