GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-1726 |
Liver
|
PAXgene |
1
|
2 pieces, minimal steatosis, reasonably well-preserved
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-1826 |
Lung
|
PAXgene |
2
|
2 pieces moderate/marked congestion/edema; foci of pneumonia and probably fibrosis
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-1926 |
Spleen
|
PAXgene |
3
|
2 pieces, moderate congestion
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2026 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, mainly cortex, focal medulla (delineated), adherent fat up to ~1-2mm on one aliquot, moderately-severely autolyzed
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, all cortex; tubules moderately-severely autolzed
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, one all fat, the other with areas of prominent adenosis/fibrocystic change, dominant area encircled
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, some have adherent fat up to ~1mm; squamous epithelium is ~50-60microns thick
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; a few foci fibrous tissue/vessels
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; minimal adherent subcutaneous fat; squamous epithelium is ~50-60microns thick
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; rim of discontinuous fat on one, up to ~0.5mm; fairly clean specimens
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces with additional minute fragments of fat/fibrous tissue, ensquared (avoid); fairly clean specimens, one a section through a bifurcation in the artery
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-2826 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~5-10% interstitial foci of fat and vessels in each, but good specimens
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, squamous epithelium is ~80 microns thick
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, one is ~10% fibrous tissue, delineated
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0426 |
Heart
|
PAXgene |
1
|
2 pieces, patchy mild-moderated interstitial fibrosis, rep. areas delineated
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, mulitple lymphoid aggregates consistent with Hashimoto's thyroiditis, rep. areas delineated; regressive/fibrotic areas present
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0626 |
Lung
|
PAXgene |
2
|
2 pieces. moderate congestion
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0726 |
Liver
|
PAXgene |
2
|
2 pieces, diffuse macrovesicular steatosis involving ~60% of parenchyma
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, good clean specimens, trace minute nubbins of fat on one aliquot, ~0.3mm
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-0926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, good clean specimens
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1026 |
Aorta
|
PAXgene |
1
|
6 pieces, adherent serosa/fat up to ~0.5mm on several sections
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, mixed fibrofatty/vascular/smooth muscle, not typical of pure esophageal muscularis, so therefore of uncertain provenance.
|
Unacceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces all adipose tissue, no ductal/lobular elements
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, minimal interstitial fat
|
Acceptable
|
 |