GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2026 |
Omentum
|
PAXgene |
1
|
2 pieces; ~5% vascular/mesothelial/fascia elements
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2126 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis appears reduced
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2226 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces; ~90% glandular parenchymal & ductal elements, good specimen
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2326 |
Ileum
|
PAXgene |
3
|
3 pieces; ~30% target lymphoid aggregates, rep. delineated
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa is ~0.25mm, lamina propria only, glandular elements with advanced autolysis
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, target muscularis is ~90% of tissue, rest is autolyzed mucosa
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2626 |
Stomach
|
PAXgene |
3
|
6 pieces (fragmented), target mucosa up to ~0.8mm, advanced autolysis/sloughing
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target muscularis is ~65% of tissue, delineated
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; target squamous mucosa up to ~0.5mm, ~15-20% of thickness
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-2926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-3126 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1OZHM
|
41-50
|
Male
|
GTEX-1OZHM-3226 |
Pituitary gland
|
PAXgene |
1
|
1 piece; adenohypophysis, ~adherent dura focally up to ~1mm
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0126 |
Spleen
|
PAXgene |
1
|
1 centrally fragmented piece
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0226 |
Lung
|
PAXgene |
1
|
2 pieces; extensive alveolar hemorrhage; smaller piece fragmented
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; 3 pieces extensively fragmented; no sign of glomerular, vascular or tubular lesions
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0426 |
Aorta
|
PAXgene |
1
|
6 pieces; slight fibrous intimal thickening; fatty adventitia up to 1.7mm thick
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; 1 with 50% fat, other with 5% fat
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0626 |
Liver
|
PAXgene |
1
|
2 pieces; <2% macrovesicular fat; no fibrosis or inflammation
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces; small amount of external fat; minimal internal fat
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibroadipose tissue with no mammary ducts
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-0926 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-1026 |
Prostate
|
PAXgene |
3
|
2 pieces; glands autolyzed, stroma intact; 1 piece is largely stroma with a 0.47 mm piece of carried over liver on edge [labeled]
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-1126 |
Skin, suprapubic
|
PAXgene |
1
|
5 pieces; abundant untrimmed subcutaneous fat; up to 7 hairs per piece
|
Acceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-1226 |
Esophagus - mucosa
|
PAXgene |
3
|
5 pieces; no epithelial layer, only muscularis mucosae & stroma
|
Unacceptable
|
|